RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.8□□□□□ -0.52
RPS28-204ENST00000602140 FIGNL1Q6PIW4 674 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 ZAR1Q86SH2 424 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 GSPT2Q8IYD1 628 aaKnown RBP11.8□□□□□ -0.52
RPS28-204ENST00000602140 CEP112Q8N8E3 955 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 CDRT4Q8N9R6 151 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 GATSQ8NAP1 163 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 NUP43Q8NFH3 380 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 OR6K3Q8NGY3 331 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 OR10D3Q8NH80 312 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 CEP70Q8NHQ1 597 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 ZFP28Q8NHY6 868 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 HOXB13Q92826 284 aaPredicted RBP11.8□□□□□ -0.52
RPS28-204ENST00000602140 CAVIN3Q969G5 261 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 PPCDCQ96CD2 204 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 ARSGQ96EG1 525 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 PERPQ96FX8 193 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 COX4I2Q96KJ9 171 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 TSSK3Q96PN8 268 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 NPAS1Q99742 590 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 REEP4Q9H6H4 257 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 PLSCR4Q9NRQ2 329 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 SH3BP4Q9P0V3 963 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 EMC9Q9Y3B6 208 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 FIS1Q9Y3D6 152 aa11.8□□□□□ -0.52
RPS28-204ENST00000602140 NSD1Q96L73 2696 aaPredicted RBP11.8□□□□□ -0.52
RPS28-204ENST00000602140 ABCA2Q9BZC7 2435 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 A0A087WZY1 265 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 A0A1W2PRB8 838 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 NPIPB8E9PQR5 432 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 RGS14O43566 566 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 KCNK2O95069 426 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 SHBGP04278 402 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 THBDP07204 575 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 NGFRP08138 427 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 ZNF17P17021 662 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 SDC1P18827 310 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 CTBP2P56545 445 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 SLC18A2Q05940 514 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 LIPMQ5VYY2 423 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 PRSS57Q6UWY2 283 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 C20orf204Q6ZNR8 217 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 Q6ZSR9 355 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 YTHDF3Q7Z739 585 aaKnown RBP11.79□□□□□ -0.52
RPS28-204ENST00000602140 WDR75Q8IWA0 830 aaKnown RBP11.79□□□□□ -0.52
RPS28-204ENST00000602140 GTPBP8Q8N3Z3 284 aaPredicted RBP11.79□□□□□ -0.52
RPS28-204ENST00000602140 SLC16A11Q8NCK7 471 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 OR2T11Q8NH01 316 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 CLHC1Q8NHS4 586 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 PPP1R14CQ8TAE6 165 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 FAM110BQ8TC76 370 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 GIMAP5Q96F15 307 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 ZBED6CLQ96FA7 236 aaPredicted RBP11.79□□□□□ -0.52
RPS28-204ENST00000602140 ZNF764Q96H86 408 aaPredicted RBP11.79□□□□□ -0.52
RPS28-204ENST00000602140 GMPPAQ96IJ6 420 aaPredicted RBP11.79□□□□□ -0.52
RPS28-204ENST00000602140 RNF145Q96MT1 663 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 CCT7Q99832 543 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 IQCGQ9H095 443 aaKnown RBP11.79□□□□□ -0.52
RPS28-204ENST00000602140 HHATLQ9HCP6 504 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 MED17Q9NVC6 651 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 FBXO34Q9NWN3 711 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 NTMQ9P121 344 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 BAIAP2L1Q9UHR4 511 aa11.79□□□□□ -0.52
RPS28-204ENST00000602140 MCTS1Q9ULC4 181 aaKnown RBP11.79□□□□□ -0.52
RPS28-204ENST00000602140 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.78□□□□□ -0.52
RPS28-204ENST00000602140 SMIM23A6NLE4 172 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 COPEO14579 308 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 TNFSF11O14788 317 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 AZIN1O14977 448 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 SMAD7O15105 426 aaKnown RBP11.78□□□□□ -0.52
RPS28-204ENST00000602140 KLF4O43474 513 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 CXCL13O43927 109 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 TBX19O60806 448 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 SS18L1O75177 396 aaPredicted RBP11.78□□□□□ -0.52
RPS28-204ENST00000602140 SYNGR4O95473 234 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 LINC00032P0C843 101 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 HPGDP15428 266 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 EFNA1P20827 205 aaPredicted RBP11.78□□□□□ -0.52
RPS28-204ENST00000602140 PSMA4P25789 261 aaKnown RBP11.78□□□□□ -0.52
RPS28-204ENST00000602140 FRKP42685 505 aaPredicted RBP11.78□□□□□ -0.52
RPS28-204ENST00000602140 RAC1P63000 192 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 RPL38P63173 70 aaKnown RBP11.78□□□□□ -0.52
RPS28-204ENST00000602140 DUSP5Q16690 384 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 CTU2Q2VPK5 515 aaKnown RBP11.78□□□□□ -0.52
RPS28-204ENST00000602140 PLPPR5Q32ZL2 321 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 RFTN2Q52LD8 501 aaPredicted RBP11.78□□□□□ -0.52
RPS28-204ENST00000602140 CPTPQ5TA50 214 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 STAC2Q6ZMT1 411 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 PLEKHM3Q6ZWE6 761 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 C10orf107Q8IVU9 208 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 OR6Y1Q8NGX8 325 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 KIF18AQ8NI77 898 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 ACTRT2Q8TDY3 377 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 ZBTB8AQ96BR9 441 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 OTUB1Q96FW1 271 aaPredicted RBP11.78□□□□□ -0.52
RPS28-204ENST00000602140 C16orf58Q96GQ5 468 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 SH3YL1Q96HL8 342 aaPredicted RBP11.78□□□□□ -0.52
RPS28-204ENST00000602140 ADGRG7Q96K78 797 aa11.78□□□□□ -0.52
RPS28-204ENST00000602140 FCRL1Q96LA6 429 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms