RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 TSNAXIP1Q2TAA8 658 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 SPIN4Q56A73 249 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 ACSM2BQ68CK6 577 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 HBMQ6B0K9 141 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 GTF2IRD2BQ6EKJ0 949 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 SEZ6L2Q6UXD5 910 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 ESPNLQ6ZVH7 1005 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 GTF2IRD2Q86UP8 949 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 OR2L13Q8N349 312 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 GTPBP8Q8N3Z3 284 aaPredicted RBP14.92□□□□□ -0.02
USE1-208ENST00000600970 SPATA4Q8NEY3 305 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 HSD17B8Q92506 261 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 RHNO1Q9BSD3 238 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 EBPLQ9BY08 206 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 SHCBP1LQ9BZQ2 653 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 TRIM2Q9C040 744 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 KCNF1Q9H3M0 494 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 ALG2Q9H553 416 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 BARX1Q9HBU1 254 aaPredicted RBP14.92□□□□□ -0.02
USE1-208ENST00000600970 CDC42EP3Q9UKI2 254 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 NFU1Q9UMS0 254 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 SNX8Q9Y5X2 465 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 YLPM1P49750 1951 aaKnown RBP14.92□□□□□ -0.02
USE1-208ENST00000600970 IGHV4-30-2A0A087WSY4 118 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 A0A096LNT2 108 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 GXYLT2A0PJZ3 443 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 DPRXA6NFQ7 191 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 SSX4O60224 188 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 SLITRK5O94991 958 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 SBK3P0C264 359 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 DDCP20711 480 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 IL32P24001 234 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 HTR6P50406 440 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 BSPH1Q075Z2 132 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 UBAP2Q5T6F2 1119 aaKnown RBP14.91□□□□□ -0.02
USE1-208ENST00000600970 GALNT18Q6P9A2 607 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 TFAP2EQ6VUC0 442 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 NUFIP2Q7Z417 695 aaKnown RBP14.91□□□□□ -0.02
USE1-208ENST00000600970 EXOC3L1Q86VI1 746 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 TMEM151AQ8N4L1 468 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 CEP112Q8N8E3 955 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 ROBO4Q8WZ75 1007 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 OSTF1Q92882 214 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 ELP4Q96EB1 424 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 RNF145Q96MT1 663 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 MRPL57Q9BQC6 102 aaKnown RBP14.91□□□□□ -0.02
USE1-208ENST00000600970 LMF2Q9BU23 707 aaKnown RBP14.91□□□□□ -0.02
USE1-208ENST00000600970 GRIP2Q9C0E4 1043 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 MRPL46Q9H2W6 279 aaKnown RBP14.91□□□□□ -0.02
USE1-208ENST00000600970 GLIPR2Q9H4G4 154 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 TMEM185BQ9H7F4 350 aa14.91□□□□□ -0.02
USE1-208ENST00000600970 DDX18Q9NVP1 670 aaKnown RBP14.91□□□□□ -0.02
USE1-208ENST00000600970 A0A1W2PRB8 838 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 C7orf72A4D263 438 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 ULK1O75385 1050 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 FESP07332 822 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 COL6A2P12110 1019 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 GABRA3P34903 492 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 BTKQ06187 659 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 C2orf80Q0P641 193 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 RASA2Q15283 850 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 PLPPR5Q32ZL2 321 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 PDSS1Q5T2R2 415 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 CPTPQ5TA50 214 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 DTX2Q86UW9 622 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 PIWIL2Q8TC59 973 aaKnown RBP14.9□□□□□ -0.02
USE1-208ENST00000600970 RNF128Q8TEB7 428 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 ABHD3Q8WU67 409 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 PIK3R3Q92569 461 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 ZBTB8AQ96BR9 441 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 C3orf14Q9HBI5 128 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 MED17Q9NVC6 651 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 CISD1Q9NZ45 108 aaKnown RBP14.9□□□□□ -0.02
USE1-208ENST00000600970 GRID1Q9ULK0 1009 aa14.9□□□□□ -0.02
USE1-208ENST00000600970 ALG1L2C9J202 215 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 NDUFB5O43674 189 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 RAMP1O60894 148 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 KCNH1O95259 989 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 OXSR1O95747 527 aaPredicted RBP14.89□□□□□ -0.03
USE1-208ENST00000600970 ADAP00813 363 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 ANXA4P09525 319 aaPredicted RBP14.89□□□□□ -0.03
USE1-208ENST00000600970 HMOX2P30519 316 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 GSTM5P46439 218 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 CARD18P57730 90 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 SLC18A2Q05940 514 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 ZNF239Q16600 458 aaKnown RBP14.89□□□□□ -0.03
USE1-208ENST00000600970 NRF1Q16656 503 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 TMEM249Q2WGJ8 235 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 UNC50Q53HI1 259 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 TMEM201Q5SNT2 666 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.89□□□□□ -0.03
USE1-208ENST00000600970 TUSC5Q8IXB3 177 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 BANPQ8N9N5 519 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 GATSQ8NAP1 163 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 OR10H5Q8NGA6 315 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 OR4C3Q8NH37 302 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 CDC26Q8NHZ8 85 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 POC1BQ8TC44 478 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 METTL6Q8TCB7 284 aa14.89□□□□□ -0.03
USE1-208ENST00000600970 KISS1RQ969F8 398 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms