RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 PCBP3P57721 371 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 PMP22Q01453 160 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 GNA13Q14344 377 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 KLHL26Q53HC5 615 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 PDZK1Q5T2W1 519 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 PRAMEF8Q5VWM4 474 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 PRAMEF7Q5VXH5 474 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 SLC30A6Q6NXT4 461 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 ERICH5Q6P6B1 374 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 BNC2Q6ZN30 1099 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 MICU2Q8IYU8 434 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 ZNF614Q8N883 585 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 FAM156AQ8NDB6 213 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 OR2M7Q8NG81 312 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 BBS10Q8TAM1 723 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 SLC39A7Q92504 469 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 PNPLA2Q96AD5 504 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 DOHHQ9BU89 302 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 RSPO3Q9BXY4 272 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 HOXD1Q9GZZ0 328 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 MTHFD2LQ9H903 347 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 TUBA8Q9NY65 449 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 CD300AQ9UGN4 299 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 ANGPT4Q9Y264 503 aa18.3■□□□□ 0.52
SHKBP1-222ENST00000600320 NINQ8N4C6 2090 aa18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 AGAP5A6NIR3 686 aa18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 EBAG9O00559 213 aa18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 SCDO00767 359 aa18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 TRIM3O75382 744 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 FOXO1Q12778 655 aa18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 SNTA1Q13424 505 aa18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 CEACAM7Q14002 265 aa18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 TBCELQ5QJ74 424 aa18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 FNDC7Q5VTL7 733 aa18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 VRK2Q86Y07 508 aa18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 TEX19Q8NA77 164 aa18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 BBC3Q96PG8 261 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 FAM173AQ9BQD7 235 aa18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 TBL1XR1Q9BZK7 514 aa18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 SUCOQ9UBS9 1254 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 DTNAQ9Y4J8 743 aa18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 WIF1Q9Y5W5 379 aa18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-222ENST00000600320 A0A1W2PQD3 144 aa18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 ELOVL7A1L3X0 281 aa18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 LRRC3CA6NJW4 275 aa18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 CLDN24A6NM45 220 aa18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 SNPHO15079 494 aa18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 OIP5O43482 229 aa18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 BCAS1O75363 584 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 ANGPTL1O95841 491 aa18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 HPGDP15428 266 aa18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 RFC3P40938 356 aa18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 KCNJ2P63252 427 aa18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 PLAURQ03405 335 aa18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 KLRB1Q12918 225 aa18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 NDUFAF6Q330K2 333 aa18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 OR52P1PQ8NH57 321 aa18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 TMEM41AQ96HV5 264 aa18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 FRMD6Q96NE9 622 aa18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 KCTD14Q9BQ13 255 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 GPC6Q9Y625 555 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-222ENST00000600320 SERINC4A6NH21 518 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 KLRC4-KLRK1H3BQV0 150 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 GNB5O14775 395 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 GYG2O15488 501 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 NDUFB5O43674 189 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 DNAJA2O60884 412 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 SORBS2O94875 1100 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 SNX4O95219 450 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 ETS2P15036 469 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 TCN1P20061 433 aaPredicted RBP18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 MSX2P35548 267 aaPredicted RBP18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 CLK3P49761 638 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 CRYBA2P53672 197 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 NCALDP61601 193 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 VEZF1Q14119 521 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 FGFBP1Q14512 234 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 SAMD4BQ5PRF9 694 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 OR5M10Q6IEU7 315 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 RPUSD3Q6P087 351 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 SLC30A8Q8IWU4 369 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 PEX5LQ8IYB4 626 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 WDSUB1Q8N9V3 476 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 ZNF527Q8NB42 609 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 CLPTM1LQ96KA5 538 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 JSRP1Q96MG2 331 aaPredicted RBP18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 TAAR6Q96RI8 345 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 KLHDC3Q9BQ90 382 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 BTBD10Q9BSF8 475 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 CHST2Q9Y4C5 530 aa18.27■□□□□ 0.52
SHKBP1-222ENST00000600320 M0QX08 132 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 ATP5HO75947 161 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 PDE5AO76074 875 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 OPN1SWP03999 348 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 DBIP07108 87 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 HSD17B1P14061 328 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 NCK1P16333 377 aa18.26■□□□□ 0.51
SHKBP1-222ENST00000600320 HTR1EP28566 365 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms