RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 TO15178 435 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 EMC8O43402 210 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 ATP6V1G1O75348 118 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 C6orf47O95873 294 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 CT45A8P0DMV1 189 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 CT45A9P0DMV2 189 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 PLA2G2AP14555 144 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 ABCD3P28288 659 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 PSPHP78330 225 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 ADARB1P78563 741 aaKnown RBP18.03■□□□□ 0.48
LSM4-203ENST00000593829 KCNC4Q03721 635 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 FXNQ16595 210 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 NTRK2Q16620 822 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 CT45A2Q5DJT8 189 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 BCORP1Q8N888 145 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 VPS37AQ8NEZ2 397 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 DNAJB8Q8NHS0 232 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 PSMA8Q8TAA3 256 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 FAM110BQ8TC76 370 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 LRRC58Q96CX6 371 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 TEX37Q96LM6 180 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 BARD1Q99728 777 aaKnown RBP18.03■□□□□ 0.48
LSM4-203ENST00000593829 NEUROD4Q9HD90 331 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 SIRT3Q9NTG7 399 aaPredicted RBP18.03■□□□□ 0.48
LSM4-203ENST00000593829 GMPR2Q9P2T1 348 aaKnown RBP18.03■□□□□ 0.48
LSM4-203ENST00000593829 OAZ3Q9UMX2 235 aa18.03■□□□□ 0.48
LSM4-203ENST00000593829 RNASET2O00584 256 aaKnown RBP18.02■□□□□ 0.48
LSM4-203ENST00000593829 CRYABP02511 175 aaKnown RBP18.02■□□□□ 0.48
LSM4-203ENST00000593829 NAGAP17050 411 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 PRKAG1P54619 331 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 WNT3P56703 355 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 EEFSECP57772 596 aaKnown RBP18.02■□□□□ 0.48
LSM4-203ENST00000593829 PRR5P85299 388 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 ZNHIT3Q15649 155 aaPredicted RBP18.02■□□□□ 0.48
LSM4-203ENST00000593829 FAM174BQ3ZCQ3 159 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 CYBRD1Q53TN4 286 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 SPANXN4Q5MJ08 99 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 ANXA8L1Q5VT79 327 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 SLC22A10Q63ZE4 541 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 SZRD1Q7Z422 152 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.02■□□□□ 0.48
LSM4-203ENST00000593829 SULF2Q8IWU5 870 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 PRR22Q8IZ63 422 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 GLB1L3Q8NCI6 653 aaPredicted RBP18.02■□□□□ 0.48
LSM4-203ENST00000593829 NUP43Q8NFH3 380 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 FAR1Q8WVX9 515 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 MIB2Q96AX9 1013 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 ITPKCQ96DU7 683 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 PLEKHA8Q96JA3 519 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 SH2D2AQ9NP31 389 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 SACM1LQ9NTJ5 587 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 SNX8Q9Y5X2 465 aa18.02■□□□□ 0.48
LSM4-203ENST00000593829 ASPDHA6ND91 283 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 TP53I11O14683 189 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 PPM1BO75688 479 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 SLC22A3O75751 556 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 P04436 131 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 S100A3P33764 101 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 PMP22Q01453 160 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 PLCXD2Q0VAA5 305 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 BLOC1S3Q6QNY0 202 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 NPSR1Q6W5P4 371 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 SLC44A2Q8IWA5 706 aaPredicted RBP18.02■□□□□ 0.47
LSM4-203ENST00000593829 SLC34A3Q8N130 599 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 OR10G3Q8NGC4 313 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 OR5M3Q8NGP4 307 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 OR13F1Q8NGS4 319 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 PAQR8Q8TEZ7 354 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 CHPT1Q8WUD6 406 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 OMA1Q96E52 524 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 FAM120BQ96EK7 910 aaKnown RBP18.02■□□□□ 0.47
LSM4-203ENST00000593829 MS4A4EQ96PG1 132 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 DCUN1D5Q9BTE7 237 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 PAIP1Q9H074 479 aaKnown RBP18.02■□□□□ 0.47
LSM4-203ENST00000593829 ZCCHC3Q9NUD5 404 aaKnown RBP18.02■□□□□ 0.47
LSM4-203ENST00000593829 ZIM2Q9NZV7 527 aa18.02■□□□□ 0.47
LSM4-203ENST00000593829 TTC36A6NLP5 189 aa18.01■□□□□ 0.47
LSM4-203ENST00000593829 NOL3O60936 208 aaKnown RBP18.01■□□□□ 0.47
LSM4-203ENST00000593829 ABCB1P08183 1280 aaPredicted RBP18.01■□□□□ 0.47
LSM4-203ENST00000593829 CCL3P10147 92 aa18.01■□□□□ 0.47
LSM4-203ENST00000593829 IL12AP29459 219 aa18.01■□□□□ 0.47
LSM4-203ENST00000593829 FBXW4P57775 412 aa18.01■□□□□ 0.47
LSM4-203ENST00000593829 GPR85P60893 370 aa18.01■□□□□ 0.47
LSM4-203ENST00000593829 HBA1P69905 142 aa18.01■□□□□ 0.47
LSM4-203ENST00000593829 FOXK1P85037 733 aa18.01■□□□□ 0.47
LSM4-203ENST00000593829 PSG6Q00889 435 aa18.01■□□□□ 0.47
LSM4-203ENST00000593829 IGFBP7Q16270 282 aa18.01■□□□□ 0.47
LSM4-203ENST00000593829 GPR107Q5VW38 600 aa18.01■□□□□ 0.47
LSM4-203ENST00000593829 ZNF773Q6PK81 442 aa18.01■□□□□ 0.47
LSM4-203ENST00000593829 DCDC5Q6ZRR9 648 aa18.01■□□□□ 0.47
LSM4-203ENST00000593829 KCTD8Q6ZWB6 473 aa18.01■□□□□ 0.47
LSM4-203ENST00000593829 TRUB1Q8WWH5 349 aaKnown RBP18.01■□□□□ 0.47
LSM4-203ENST00000593829 LMF2Q9BU23 707 aaKnown RBP18.01■□□□□ 0.47
LSM4-203ENST00000593829 CXorf36Q9H7Y0 433 aa18.01■□□□□ 0.47
LSM4-203ENST00000593829 EQTNQ9NQ60 294 aa18.01■□□□□ 0.47
LSM4-203ENST00000593829 CNIH4Q9P003 139 aa18.01■□□□□ 0.47
LSM4-203ENST00000593829 OR10H1Q9Y4A9 318 aa18.01■□□□□ 0.47
LSM4-203ENST00000593829 CHCHD2Q9Y6H1 151 aaPredicted RBP18.01■□□□□ 0.47
LSM4-203ENST00000593829 PRRC2CQ9Y520 2896 aaKnown RBP18.01■□□□□ 0.47
LSM4-203ENST00000593829 EI24O14681 340 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms