RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PRPS2P11908 318 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 IL11P20809 199 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 CTBP2P56545 445 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 SLC18A2Q05940 514 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 ZNF844Q08AG5 666 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 SLC29A2Q14542 456 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 ZNF385BQ569K4 471 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 IKBIPQ70UQ0 350 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 WDR75Q8IWA0 830 aaKnown RBP14.62□□□□□ -0.07
LIG1-205ENST00000593425 GTPBP8Q8N3Z3 284 aaPredicted RBP14.62□□□□□ -0.07
LIG1-205ENST00000593425 LRRN4CLQ8ND94 238 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 FAM76AQ8TAV0 307 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 FBXO30Q8TB52 745 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 CIDECQ96AQ7 238 aaPredicted RBP14.62□□□□□ -0.07
LIG1-205ENST00000593425 GIMAP5Q96F15 307 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 RNF145Q96MT1 663 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 TMEM204Q9BSN7 226 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 ACTR6Q9GZN1 396 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 TMEM185BQ9H7F4 350 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 MCTS1Q9ULC4 181 aaKnown RBP14.62□□□□□ -0.07
LIG1-205ENST00000593425 WBP11Q9Y2W2 641 aaKnown RBP14.62□□□□□ -0.07
LIG1-205ENST00000593425 CCL27Q9Y4X3 112 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 PTGDR2Q9Y5Y4 395 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 A0A087WZY1 265 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 A0A0J9YW62 118 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 A0A1W2PRB8 838 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 TTC36A6NLP5 189 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 HS3ST1O14792 307 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 PDPK1O15530 556 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 RIPK2O43353 540 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 NDUFB5O43674 189 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 GSTA1P08263 222 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 ACP2P11117 423 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 AGTR1P30556 359 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 NR1H2P55055 460 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 KRTAP1-1Q07627 177 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 KIAA0040Q15053 153 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 PLPPR5Q32ZL2 321 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 FIGNL1Q6PIW4 674 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 ZYG11AQ6WRX3 759 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 ZNF611Q8N823 705 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 OR2V1Q8NHB1 315 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 POC1BQ8TC44 478 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 ACMSDQ8TDX5 336 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 ZBTB8AQ96BR9 441 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 CXorf56Q9H5V9 222 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 C12orf49Q9H741 205 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 MED17Q9NVC6 651 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 FBXO34Q9NWN3 711 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 STOML1Q9UBI4 398 aa14.61□□□□□ -0.07
LIG1-205ENST00000593425 ANK3Q12955 4377 aaKnown RBP14.6□□□□□ -0.07
LIG1-205ENST00000593425 C7orf72A4D263 438 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 ADAMDEC1O15204 470 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 NGFRP08138 427 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 MYL2P10916 166 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 SHC1P29353 583 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 GPC1P35052 558 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 PRKAG1P54619 331 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 ATP5J2P56134 94 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 RAC1P63000 192 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 TNK1Q13470 666 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 GLE1Q53GS7 698 aaKnown RBP14.6□□□□□ -0.07
LIG1-205ENST00000593425 MFSD12Q6NUT3 480 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 BEND4Q6ZU67 534 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 FRMD7Q6ZUT3 714 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 ESPNLQ6ZVH7 1005 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 CEP112Q8N8E3 955 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 CDRT4Q8N9R6 151 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 SLC16A11Q8NCK7 471 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 NUP43Q8NFH3 380 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 RAB3IL1Q8TBN0 382 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 FAM110BQ8TC76 370 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 AKAP1Q92667 903 aaKnown RBP eCLIP14.6□□□□□ -0.07
LIG1-205ENST00000593425 OTUB1Q96FW1 271 aaPredicted RBP14.6□□□□□ -0.07
LIG1-205ENST00000593425 SH3YL1Q96HL8 342 aaPredicted RBP14.6□□□□□ -0.07
LIG1-205ENST00000593425 RRAGDQ9NQL2 400 aaPredicted RBP14.6□□□□□ -0.07
LIG1-205ENST00000593425 PAQR5Q9NXK6 330 aaPredicted RBP14.6□□□□□ -0.07
LIG1-205ENST00000593425 TBK1Q9UHD2 729 aa14.6□□□□□ -0.07
LIG1-205ENST00000593425 PRR14LQ5THK1 2151 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 A0A1W2PPM1 405 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 SEC22BO75396 215 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 CRCPO75575 148 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 SOX30O94993 753 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 KCNK2O95069 426 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 SYNGR4O95473 234 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 TUBBP07437 444 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 PSMB1P20618 241 aaKnown RBP14.59□□□□□ -0.07
LIG1-205ENST00000593425 PRPH2P23942 346 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 TSC22D1Q15714 1073 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 CD226Q15762 336 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 DUSP5Q16690 384 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 VPS26BQ4G0F5 336 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 CPTPQ5TA50 214 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 HBMQ6B0K9 141 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 CLEC6AQ6EIG7 209 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 ALKBH2Q6NS38 261 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 SZRD1Q7Z422 152 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 MAPK1IP1LQ8NDC0 245 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 CCDC126Q96EE4 140 aa14.59□□□□□ -0.07
LIG1-205ENST00000593425 MS4A4EQ96PG1 132 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms