RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SLC26A5P58743 744 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 RPS15P62841 145 aaKnown RBP12.42□□□□□ -0.42
VMP1-217ENST00000593168 RNF4P78317 190 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 PCOLCEQ15113 449 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 DECR1Q16698 335 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 ZSWIM7Q19AV6 140 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 FLYWCH1Q4VC44 716 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 PPP4R4Q6NUP7 873 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 HSDL2Q6YN16 418 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 ZBTB49Q6ZSB9 765 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 CARM1Q86X55 608 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 VRK2Q86Y07 508 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 SVOPLQ8N434 492 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 PACRGLQ8N7B6 248 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 ZNF441Q8N8Z8 693 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 TMBIM1Q969X1 311 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 NRBF2Q96F24 287 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 VPS50Q96JG6 964 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 ARHGDIGQ99819 225 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 TACO1Q9BSH4 297 aaKnown RBP12.42□□□□□ -0.42
VMP1-217ENST00000593168 WWTR1Q9GZV5 400 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 HOXD1Q9GZZ0 328 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 ZNF700Q9H0M5 742 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 NXF5Q9H1B4 397 aaKnown RBP12.42□□□□□ -0.42
VMP1-217ENST00000593168 VCXQ9H320 206 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 COQ10BQ9H8M1 238 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 EVA1AQ9H8M9 152 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 KLHL28Q9NXS3 571 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 ZNF223Q9UK11 482 aaPredicted RBP12.42□□□□□ -0.42
VMP1-217ENST00000593168 SLC13A4Q9UKG4 626 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 TCFL5Q9UL49 500 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 ZNF443Q9Y2A4 671 aaPredicted RBP12.42□□□□□ -0.42
VMP1-217ENST00000593168 FAM32AQ9Y421 112 aaKnown RBP12.42□□□□□ -0.42
VMP1-217ENST00000593168 LRRC42Q9Y546 428 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 HS3ST3B1Q9Y662 390 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 NINQ8N4C6 2090 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 DOPEY2Q9Y3R5 2298 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 TLN1Q9Y490 2541 aaKnown RBP12.41□□□□□ -0.42
VMP1-217ENST00000593168 SAC3D1A6NKF1 404 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.41□□□□□ -0.42
VMP1-217ENST00000593168 ADAMDEC1O15204 470 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 RAD1O60671 282 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 UGT2B17O75795 530 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 DNAJB5O75953 348 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 SEC24DO94855 1032 aaPredicted RBP12.41□□□□□ -0.42
VMP1-217ENST00000593168 EPPINO95925 133 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 LIPCP11150 499 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 NID1P14543 1247 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 WT1P19544 449 aaPredicted RBP12.41□□□□□ -0.42
VMP1-217ENST00000593168 TNFRSF1BP20333 461 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 ATP12AP54707 1039 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 EEF1A1P68104 462 aaKnown RBP12.41□□□□□ -0.42
VMP1-217ENST00000593168 GK3PQ14409 553 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 SSPNQ14714 243 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 ZNF141Q15928 474 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 TBR1Q16650 682 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 NRF1Q16656 503 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 LIN52Q52LA3 116 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 EIPR1Q53HC9 387 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 SDK2Q58EX2 2172 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 RNF220Q5VTB9 566 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 TCTN3Q6NUS6 607 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 HMGN2P46Q86SG4 172 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 VASH2Q86V25 355 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 OR5L2Q8NGL0 311 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 OR5K1Q8NHB7 308 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 C8orf44Q96CB5 159 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 GAL3ST4Q96RP7 486 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 CIB1Q99828 191 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 MESP1Q9BRJ9 268 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 ARMC7Q9H6L4 198 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 REEP1Q9H902 201 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 KCNE5Q9UJ90 142 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 OAZ3Q9UMX2 235 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 CHST2Q9Y4C5 530 aa12.41□□□□□ -0.42
VMP1-217ENST00000593168 IGHV1-45A0A0A0MS14 117 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 G3V2T6 193 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 STMND1H3BQB6 276 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 E2F6O75461 281 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 ZFAND5O76080 213 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 DIRAS1O95057 198 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 COX6A1P12074 109 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 ZNF23P17027 643 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 FPR1P21462 350 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 DNAJA1P31689 397 aaKnown RBP12.4□□□□□ -0.42
VMP1-217ENST00000593168 DCTP40126 519 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 STAT5AP42229 794 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 RFX3P48380 749 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 NR0B1P51843 470 aaKnown RBP12.4□□□□□ -0.42
VMP1-217ENST00000593168 ARHGDIAP52565 204 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 HMGA2P52926 109 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 DNASE1L3Q13609 305 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 EXT1Q16394 746 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 NNATQ16517 81 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 MAPK14Q16539 360 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 FAM69BQ5VUD6 431 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 SHQ1Q6PI26 577 aaKnown RBP12.4□□□□□ -0.42
VMP1-217ENST00000593168 KIRREL2Q6UWL6 708 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 IZUMO2Q6UXV1 221 aa12.4□□□□□ -0.42
VMP1-217ENST00000593168 ZNF836Q6ZNA1 936 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms