RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 SQLEQ14534 574 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 MAPK11Q15759 364 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 CD226Q15762 336 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 AGKQ53H12 422 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.91□□□□□ -0.18
TRIM47-206ENST00000592942 METTL21CQ5VZV1 264 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 RTL6Q6ICC9 239 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 RNF130Q86XS8 419 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 ZG16BQ96DA0 208 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 SPDL1Q96EA4 605 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 ITCHQ96J02 903 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 TBL1XR1Q9BZK7 514 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 SAP130Q9H0E3 1048 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 SDHAF3Q9NRP4 125 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 PPP4R1LQ9P1A2 415 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 PCDHB14Q9Y5E9 798 aa13.91□□□□□ -0.18
TRIM47-206ENST00000592942 PCNX1Q96RV3 2341 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 E9PLN8 166 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 BCKDKO14874 412 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 GUSBP08236 651 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 NCF2P19878 526 aaPredicted RBP13.9□□□□□ -0.18
TRIM47-206ENST00000592942 CHI3L1P36222 383 aaPredicted RBP13.9□□□□□ -0.18
TRIM47-206ENST00000592942 CLK3P49761 638 aaKnown RBP13.9□□□□□ -0.18
TRIM47-206ENST00000592942 ATP12AP54707 1039 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 GFRA1P56159 465 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 STX5Q13190 355 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 TOMM20Q15388 145 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 DCST1Q5T197 706 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 MSRB3Q8IXL7 192 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 TRIML2Q8N7C3 387 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 SARAFQ96BY9 339 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 AURKBQ96GD4 344 aaPredicted RBP13.9□□□□□ -0.18
TRIM47-206ENST00000592942 WDYHV1Q96HA8 205 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 VKORC1Q9BQB6 163 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 UGT2B28Q9BY64 529 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 ZNF350Q9GZX5 532 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 HOXD1Q9GZZ0 328 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 EXO5Q9H790 373 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 RMND5AQ9H871 391 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 TPT1P8Q9HAU6 139 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 SLC25A37Q9NYZ2 338 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 ACAD8Q9UKU7 415 aa13.9□□□□□ -0.18
TRIM47-206ENST00000592942 NCOA6Q14686 2063 aaPredicted RBP13.89□□□□□ -0.19
TRIM47-206ENST00000592942 CENPVL1A0A0U1RR11 272 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 GMNCA6NCL1 334 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 OIP5O43482 229 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 NDUFB5O43674 189 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 AK1P00568 194 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 DPP4P27487 766 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 DCTP40126 519 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 CASP6P55212 293 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 DSCR4P56555 118 aaPredicted RBP13.89□□□□□ -0.19
TRIM47-206ENST00000592942 CDSNQ15517 529 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 ZNF141Q15928 474 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 MAPK14Q16539 360 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 TMEM44Q2T9K0 475 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 LRIF1Q5T3J3 769 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 TYW3Q6IPR3 259 aaKnown RBP13.89□□□□□ -0.19
TRIM47-206ENST00000592942 DNAJC14Q6Y2X3 702 aaPredicted RBP13.89□□□□□ -0.19
TRIM47-206ENST00000592942 GATSQ8NAP1 163 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 PNPT1Q8TCS8 783 aaKnown RBP13.89□□□□□ -0.19
TRIM47-206ENST00000592942 ITLN2Q8WWU7 325 aaPredicted RBP13.89□□□□□ -0.19
TRIM47-206ENST00000592942 ABTB1Q969K4 478 aaPredicted RBP13.89□□□□□ -0.19
TRIM47-206ENST00000592942 ZNF524Q96C55 264 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 ROPN1LQ96C74 230 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 TP63Q9H3D4 680 aaPredicted RBP13.89□□□□□ -0.19
TRIM47-206ENST00000592942 TAS2R10Q9NYW0 307 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 MKLN1Q9UL63 735 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 FAM215AQ9Y5M1 114 aa13.89□□□□□ -0.19
TRIM47-206ENST00000592942 ICE1Q9Y2F5 2266 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 A0A096LPI6 279 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 TRBV5-3A0A0A0MS03 114 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 C15orf38-AP3S2A0A0A6YYH1 394 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 A0A1W2PP18 115 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 KDM4EB2RXH2 506 aaPredicted RBP13.88□□□□□ -0.19
TRIM47-206ENST00000592942 NR5A2O00482 541 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 SCDO00767 359 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 STX11O75558 287 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 UGT2B17O75795 530 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 KRT75O95678 551 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 CLDN1O95832 211 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 AGR2O95994 175 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 TROVE2P10155 538 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRIM47-206ENST00000592942 ATP6V1C1P21283 382 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 RNF144AP50876 292 aaPredicted RBP13.88□□□□□ -0.19
TRIM47-206ENST00000592942 ARFIP2P53365 341 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 GPR68Q15743 365 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 SYPL1Q16563 259 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 FLYWCH1Q4VC44 716 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 WLSQ5T9L3 541 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 ZNF585AQ6P3V2 769 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 ARSKQ6UWY0 536 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 DLEU7Q6UYE1 221 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 FRRS1Q6ZNA5 592 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 SEM1Q6ZVN7 128 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 ANKFN1Q8N957 763 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 OR4K17Q8NGC6 315 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 OR14L1PQ8NHC6 308 aa13.88□□□□□ -0.19
TRIM47-206ENST00000592942 PHF10Q8WUB8 498 aaKnown RBP13.88□□□□□ -0.19
TRIM47-206ENST00000592942 C1GALT1C1Q96EU7 318 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms