RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ADAMDEC1O15204 470 aa16.95■□□□□ 0.3
CCDC43-205ENST00000592333 SEC14L5O43304 696 aa16.95■□□□□ 0.3
CCDC43-205ENST00000592333 SDC1P18827 310 aa16.95■□□□□ 0.3
CCDC43-205ENST00000592333 KRT4P19013 534 aa16.95■□□□□ 0.3
CCDC43-205ENST00000592333 TCEA1P23193 301 aaKnown RBP16.95■□□□□ 0.3
CCDC43-205ENST00000592333 RFX3P48380 749 aa16.95■□□□□ 0.3
CCDC43-205ENST00000592333 RAC1P63000 192 aa16.95■□□□□ 0.3
CCDC43-205ENST00000592333 KANK2Q63ZY3 851 aa16.95■□□□□ 0.3
CCDC43-205ENST00000592333 CLEC6AQ6EIG7 209 aa16.95■□□□□ 0.3
CCDC43-205ENST00000592333 APOOLQ6UXV4 268 aa16.95■□□□□ 0.3
CCDC43-205ENST00000592333 C20orf204Q6ZNR8 217 aa16.95■□□□□ 0.3
CCDC43-205ENST00000592333 GGNQ86UU5 652 aa16.95■□□□□ 0.3
CCDC43-205ENST00000592333 NUP43Q8NFH3 380 aa16.95■□□□□ 0.3
CCDC43-205ENST00000592333 OR6K3Q8NGY3 331 aa16.95■□□□□ 0.3
CCDC43-205ENST00000592333 GIMAP5Q96F15 307 aa16.95■□□□□ 0.3
CCDC43-205ENST00000592333 GMPPAQ96IJ6 420 aaPredicted RBP16.95■□□□□ 0.3
CCDC43-205ENST00000592333 OPN3Q9H1Y3 402 aaPredicted RBP16.95■□□□□ 0.3
CCDC43-205ENST00000592333 OR10A4Q9H209 315 aa16.95■□□□□ 0.3
CCDC43-205ENST00000592333 DNAJC15Q9Y5T4 150 aa16.95■□□□□ 0.3
CCDC43-205ENST00000592333 VPS13CQ709C8 3753 aa16.94■□□□□ 0.3
CCDC43-205ENST00000592333 GXYLT2A0PJZ3 443 aa16.94■□□□□ 0.3
CCDC43-205ENST00000592333 H0YC42 278 aa16.94■□□□□ 0.3
CCDC43-205ENST00000592333 TMCC2O75069 709 aa16.94■□□□□ 0.3
CCDC43-205ENST00000592333 OXSR1O95747 527 aaPredicted RBP16.94■□□□□ 0.3
CCDC43-205ENST00000592333 IGKV1D-16P01601 117 aa16.94■□□□□ 0.3
CCDC43-205ENST00000592333 KCNJ5P48544 419 aa16.94■□□□□ 0.3
CCDC43-205ENST00000592333 TPD52P55327 224 aaPredicted RBP16.94■□□□□ 0.3
CCDC43-205ENST00000592333 ACKR1Q16570 336 aa16.94■□□□□ 0.3
CCDC43-205ENST00000592333 RFTN2Q52LD8 501 aaPredicted RBP16.94■□□□□ 0.3
CCDC43-205ENST00000592333 EXOSC6Q5RKV6 272 aaKnown RBP16.94■□□□□ 0.3
CCDC43-205ENST00000592333 PDSS1Q5T2R2 415 aa16.94■□□□□ 0.3
CCDC43-205ENST00000592333 CPTPQ5TA50 214 aa16.94■□□□□ 0.3
CCDC43-205ENST00000592333 GTF2IRD2BQ6EKJ0 949 aa16.94■□□□□ 0.3
CCDC43-205ENST00000592333 ESPNLQ6ZVH7 1005 aa16.94■□□□□ 0.3
CCDC43-205ENST00000592333 GTF2IRD2Q86UP8 949 aa16.94■□□□□ 0.3
CCDC43-205ENST00000592333 OR4C3Q8NH37 302 aa16.94■□□□□ 0.3
CCDC43-205ENST00000592333 UBLCP1Q8WVY7 318 aaPredicted RBP16.94■□□□□ 0.3
CCDC43-205ENST00000592333 PIK3R3Q92569 461 aa16.94■□□□□ 0.3
CCDC43-205ENST00000592333 MARK4Q96L34 752 aa16.94■□□□□ 0.3
CCDC43-205ENST00000592333 STACQ99469 402 aa16.94■□□□□ 0.3
CCDC43-205ENST00000592333 EML4Q9HC35 981 aaKnown RBP16.94■□□□□ 0.3
CCDC43-205ENST00000592333 DUSP22Q9NRW4 184 aa16.94■□□□□ 0.3
CCDC43-205ENST00000592333 SH3BP4Q9P0V3 963 aa16.94■□□□□ 0.3
CCDC43-205ENST00000592333 MCTS1Q9ULC4 181 aaKnown RBP16.94■□□□□ 0.3
CCDC43-205ENST00000592333 TMEM114B3SHH9 223 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 LSM1O15116 133 aaKnown RBP16.93■□□□□ 0.3
CCDC43-205ENST00000592333 NPHS1O60500 1241 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 SMPD2O60906 423 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 SS18L1O75177 396 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-205ENST00000592333 KCNK2O95069 426 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 SHBGP04278 402 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 INHBBP09529 407 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 ALOX5P09917 674 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 HPGDP15428 266 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 MAPK1P28482 360 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 EIF1P41567 113 aaKnown RBP16.93■□□□□ 0.3
CCDC43-205ENST00000592333 PRIM2P49643 509 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 MFSD12Q6NUT3 480 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 MTERF4Q7Z6M4 381 aaKnown RBP16.93■□□□□ 0.3
CCDC43-205ENST00000592333 EXOC3L1Q86VI1 746 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 KRTAP1-3Q8IUG1 177 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 C10orf107Q8IVU9 208 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 RIBC1Q8N443 379 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-205ENST00000592333 ZNF610Q8N9Z0 462 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 SLC16A11Q8NCK7 471 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 OR2T11Q8NH01 316 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 SLC9A6Q92581 669 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 CIDECQ96AQ7 238 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-205ENST00000592333 ADGRG7Q96K78 797 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 GATA5Q9BWX5 397 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-205ENST00000592333 PRRG4Q9BZD6 226 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 TUBB1Q9H4B7 451 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 EQTNQ9NQ60 294 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 KLHL28Q9NXS3 571 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 C6orf203Q9P0P8 240 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-205ENST00000592333 ATP6V1HQ9UI12 483 aa16.93■□□□□ 0.3
CCDC43-205ENST00000592333 EIF1AYO14602 144 aaKnown RBP16.92■□□□□ 0.3
CCDC43-205ENST00000592333 SIAH2O43255 324 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 AQP8O94778 261 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 PABPC4LP0CB38 370 aaKnown RBP16.92■□□□□ 0.3
CCDC43-205ENST00000592333 ME2P23368 584 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 PSMA4P25789 261 aaKnown RBP16.92■□□□□ 0.3
CCDC43-205ENST00000592333 ADH6P28332 368 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 CCKARP32238 428 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 SERPINB5P36952 375 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 EIF1AXP47813 144 aaKnown RBP16.92■□□□□ 0.3
CCDC43-205ENST00000592333 ZNF41P51814 821 aaPredicted RBP16.92■□□□□ 0.3
CCDC43-205ENST00000592333 PRKAG1P54619 331 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 RPL38P63173 70 aaKnown RBP16.92■□□□□ 0.3
CCDC43-205ENST00000592333 SIRPAP78324 504 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 PCLAFQ15004 111 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 ZNF385BQ569K4 471 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 BEND4Q6ZU67 534 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 TRABD2AQ86V40 505 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 P3H2Q8IVL5 708 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 OR5M1Q8NGP8 315 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 PIK3IP1Q96FE7 263 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 PPP3R2Q96LZ3 170 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 TSSK3Q96PN8 268 aa16.92■□□□□ 0.3
CCDC43-205ENST00000592333 BTBD2Q9BX70 525 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms