RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 NCKAP5O14513 1909 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 ABCA12Q86UK0 2595 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 PDZD2O15018 2839 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 CACNA1CQ13936 2221 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 ZNF407Q9C0G0 2248 aa6.91□□□□□ -1.3
VMP1-213ENST00000591877 FBN2P35556 2912 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 DCHS2Q6V1P9 2916 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 WASHC1A8K0Z3 465 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 PLPP1O14494 284 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 SPRY2O43597 315 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 TMPRSS11DO60235 418 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 FGF17O60258 216 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 SLC19A2O60779 497 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 PRKRAO75569 313 aaKnown RBP6.9□□□□□ -1.3
VMP1-213ENST00000591877 ZFAND5O76080 213 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 SIX3O95343 332 aaPredicted RBP6.9□□□□□ -1.3
VMP1-213ENST00000591877 ETHE1O95571 254 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 IL6RP08887 468 aaPredicted RBP6.9□□□□□ -1.3
VMP1-213ENST00000591877 ZNF10P21506 573 aaPredicted RBP6.9□□□□□ -1.3
VMP1-213ENST00000591877 TYK2P29597 1187 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 HPDP32754 393 aaPredicted RBP6.9□□□□□ -1.3
VMP1-213ENST00000591877 HNRNPH2P55795 449 aaKnown RBP6.9□□□□□ -1.3
VMP1-213ENST00000591877 RPS13P62277 151 aaKnown RBP6.9□□□□□ -1.3
VMP1-213ENST00000591877 IGLV3-21P80748 117 aaPredicted RBP6.9□□□□□ -1.3
VMP1-213ENST00000591877 ID2Q02363 134 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 UAP1Q16222 522 aaPredicted RBP6.9□□□□□ -1.3
VMP1-213ENST00000591877 FAM83EQ2M2I3 478 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 TMEM35AQ53FP2 167 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 KRTCAP3Q53RY4 240 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 KHDRBS2Q5VWX1 349 aaKnown RBP6.9□□□□□ -1.3
VMP1-213ENST00000591877 LIPJQ5W064 366 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 FAM219BQ5XKK7 198 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 OR4C11Q6IEV9 310 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 VWA1Q6PCB0 445 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 DGAT2L6Q6ZPD8 337 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 NCCRP1Q6ZVX7 275 aaPredicted RBP6.9□□□□□ -1.3
VMP1-213ENST00000591877 GOLGA7Q7Z5G4 137 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 CCDC91Q7Z6B0 441 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 P3H2Q8IVL5 708 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 OR4N5Q8IXE1 308 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 HORMAD2Q8N7B1 307 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 OR52L2PQ8NGH6 319 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 HUS1BQ8NHY5 278 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 NFKBIDQ8NI38 313 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 WDR20Q8TBZ3 569 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 SLC44A1Q8WWI5 657 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 UCN3Q969E3 161 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 UBE2E3Q969T4 207 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 MTERF1Q99551 399 aaKnown RBP6.9□□□□□ -1.3
VMP1-213ENST00000591877 DPCDQ9BVM2 203 aaPredicted RBP6.9□□□□□ -1.3
VMP1-213ENST00000591877 ROGDIQ9GZN7 287 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 COPS7BQ9H9Q2 264 aaPredicted RBP6.9□□□□□ -1.3
VMP1-213ENST00000591877 DEPPQ9NTK1 212 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 TBCCD1Q9NVR7 557 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 C11orf21Q9P2W6 132 aa6.9□□□□□ -1.3
VMP1-213ENST00000591877 MRPS33Q9Y291 106 aaKnown RBP6.9□□□□□ -1.3
VMP1-213ENST00000591877 EXPH5Q8NEV8 1989 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 DNAJC13O75165 2243 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 MYO9AB2RTY4 2548 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 PINLYPA6NC86 204 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 SYCE1LA8MT33 242 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 C17orf105B2RV13 164 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 H0YIV9 168 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 WWP2O00308 870 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 OR7A17O14581 309 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 ADAM10O14672 748 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 PEX1O43933 1283 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 EEDO75530 441 aaKnown RBP6.89□□□□□ -1.31
VMP1-213ENST00000591877 OR2J2O76002 312 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 OR6B1O95007 311 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 ACSL3O95573 720 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 IFNA16P05015 189 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 GFAPP14136 432 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 PRF1P14222 555 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 ZNF24P17028 368 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 CPN2P22792 545 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 SERPINB1P30740 379 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 PTGER1P34995 402 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 PHBP35232 272 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 BSGP35613 385 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 RFC3P40938 356 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 SOX3P41225 446 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 SSR2P43308 183 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 SERPINB8P50452 374 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 SSR4P51571 173 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 TPTEP56180 551 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 RPP30P78346 268 aaKnown RBP6.89□□□□□ -1.31
VMP1-213ENST00000591877 RBPJQ06330 500 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 TGM3Q08188 693 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 STX4Q12846 297 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 SLAMF1Q13291 335 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 DDX39BQ13838 428 aaKnown RBP6.89□□□□□ -1.31
VMP1-213ENST00000591877 GTF2H2Q13888 395 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 SEC23BQ15437 767 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 AP5B1Q2VPB7 878 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 C18orf63Q68DL7 685 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 GTF2H2CQ6P1K8 395 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 WDR93Q6P2C0 686 aa6.89□□□□□ -1.31
VMP1-213ENST00000591877 R3HCC1LQ7Z5L2 792 aaKnown RBP6.89□□□□□ -1.31
VMP1-213ENST00000591877 MRGPRGQ86SM5 289 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms