RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 ALG1L2C9J202 215 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 NPIPB9F8W1W9 429 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 NDUFB5O43674 189 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 GMNNO75496 209 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 UGT2B17O75795 530 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 DBIP07108 87 aaKnown RBP12.47□□□□□ -0.41
VMP1-210ENST00000589823 ETS2P15036 469 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 IL7RP16871 459 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 TCN1P20061 433 aaPredicted RBP12.47□□□□□ -0.41
VMP1-210ENST00000589823 ENDOUP21128 410 aaKnown RBP12.47□□□□□ -0.41
VMP1-210ENST00000589823 AQP1P29972 269 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 MASP1P48740 699 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 GPR85P60893 370 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 KLRB1Q12918 225 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 LARS2Q15031 903 aaKnown RBP12.47□□□□□ -0.41
VMP1-210ENST00000589823 LIN52Q52LA3 116 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 KLHL26Q53HC5 615 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 PDZK1Q5T2W1 519 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 PATL1Q86TB9 770 aaKnown RBP12.47□□□□□ -0.41
VMP1-210ENST00000589823 MARCH3Q86UD3 253 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 PACS2Q86VP3 889 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 MISPQ8IVT2 679 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 SULF2Q8IWU5 870 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 RNF148Q8N7C7 305 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 OR2M7Q8NG81 312 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 RNF138Q8WVD3 245 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 PNPLA2Q96AD5 504 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 ZNF597Q96LX8 424 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 THTPAQ9BU02 230 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 QRSL1Q9H0R6 528 aaKnown RBP12.47□□□□□ -0.41
VMP1-210ENST00000589823 GALNT9Q9HCQ5 603 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.47□□□□□ -0.41
VMP1-210ENST00000589823 PACSIN3Q9UKS6 424 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 BOKQ9UMX3 212 aaPredicted RBP12.47□□□□□ -0.41
VMP1-210ENST00000589823 IFT52Q9Y366 437 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 WIF1Q9Y5W5 379 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 C2orf72A6NCS6 295 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 SERINC4A6NH21 518 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 GTPBP1O00178 669 aaKnown RBP12.46□□□□□ -0.41
VMP1-210ENST00000589823 SERPINB7O75635 380 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 RASAL1O95294 804 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 ANGPTL1O95841 491 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 HSD17B1P14061 328 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 HTR1EP28566 365 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 PTGDSP41222 190 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 DNASE1L1P49184 302 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 MEOX1P50221 254 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 PCBP3P57721 371 aaKnown RBP12.46□□□□□ -0.41
VMP1-210ENST00000589823 PLGLB1Q02325 96 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 C17orf67Q0P5P2 114 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 INAQ16352 499 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 MAPK14Q16539 360 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 PLEKHN1Q494U1 663 aaPredicted RBP12.46□□□□□ -0.41
VMP1-210ENST00000589823 NADK2Q4G0N4 442 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 RPUSD3Q6P087 351 aaKnown RBP12.46□□□□□ -0.41
VMP1-210ENST00000589823 PCSK4Q6UW60 755 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 APOOLQ6UXV4 268 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.46□□□□□ -0.41
VMP1-210ENST00000589823 HMGN2P46Q86SG4 172 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 GATSQ8NAP1 163 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 LSM14AQ8ND56 463 aaKnown RBP12.46□□□□□ -0.41
VMP1-210ENST00000589823 OR52P1PQ8NH57 321 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 PHOSPHO1Q8TCT1 267 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 WDR60Q8WVS4 1066 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 FIG4Q92562 907 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 ZG16BQ96DA0 208 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 TMEM41AQ96HV5 264 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 JSRP1Q96MG2 331 aaPredicted RBP12.46□□□□□ -0.41
VMP1-210ENST00000589823 ARMC7Q9H6L4 198 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 PROK2Q9HC23 129 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 DEPPQ9NTK1 212 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 PPP4R1LQ9P1A2 415 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 GMPR2Q9P2T1 348 aaKnown RBP12.46□□□□□ -0.41
VMP1-210ENST00000589823 CD300AQ9UGN4 299 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 SLC35A3Q9Y2D2 325 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 GPC6Q9Y625 555 aaPredicted RBP12.46□□□□□ -0.41
VMP1-210ENST00000589823 EXPH5Q8NEV8 1989 aa12.46□□□□□ -0.41
VMP1-210ENST00000589823 A0A0G2JMM0 328 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 CENPVL1A0A0U1RR11 272 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 A0A1W2PPB8 328 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 A0A1W2PRS3 328 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 KIR3DP1A8MWS1 328 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 CXCR6O00574 342 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 SNPHO15079 494 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 ATXN7O15265 892 aaPredicted RBP12.45□□□□□ -0.42
VMP1-210ENST00000589823 TRIM3O75382 744 aaPredicted RBP12.45□□□□□ -0.42
VMP1-210ENST00000589823 DNAJC8O75937 253 aaPredicted RBP12.45□□□□□ -0.42
VMP1-210ENST00000589823 CSTAP01040 98 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 IFNA14P01570 189 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 THBS1P07996 1170 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 PABPC4LP0CB38 370 aaKnown RBP12.45□□□□□ -0.42
VMP1-210ENST00000589823 NID1P14543 1247 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 RPS4Y1P22090 263 aaKnown RBP12.45□□□□□ -0.42
VMP1-210ENST00000589823 ELAVL4P26378 380 aaKnown RBP12.45□□□□□ -0.42
VMP1-210ENST00000589823 PGM1P36871 562 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 RNF144AP50876 292 aaPredicted RBP12.45□□□□□ -0.42
VMP1-210ENST00000589823 GAS1P54826 345 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 CEACAM7Q14002 265 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 FGFBP1Q14512 234 aa12.45□□□□□ -0.42
VMP1-210ENST00000589823 ZNF311Q5JNZ3 666 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms