RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 RPTNQ6XPR3 784 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 ACAD11Q709F0 780 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 MAMDC2Q7Z304 686 aaPredicted RBP9.46□□□□□ -0.9
SDF2-208ENST00000589788 SPATA19Q7Z5L4 167 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 CAMKMTQ7Z624 323 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 VPS37AQ8NEZ2 397 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 OR56A1Q8NGH5 318 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 NEIL3Q8TAT5 605 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 FBXO30Q8TB52 745 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 PIK3R3Q92569 461 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 FAM120BQ96EK7 910 aaKnown RBP9.46□□□□□ -0.9
SDF2-208ENST00000589788 DTNBP1Q96EV8 351 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 RMND5BQ96G75 393 aaPredicted RBP9.46□□□□□ -0.9
SDF2-208ENST00000589788 ZBTB18Q99592 522 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 VKORC1Q9BQB6 163 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 YIPF4Q9BSR8 244 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 TMEM120AQ9BXJ8 343 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 SLC6A15Q9H2J7 730 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 TP63Q9H3D4 680 aaPredicted RBP9.46□□□□□ -0.9
SDF2-208ENST00000589788 WDR55Q9H6Y2 383 aaPredicted RBP9.46□□□□□ -0.9
SDF2-208ENST00000589788 ACKR4Q9NPB9 350 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 SIRT3Q9NTG7 399 aaPredicted RBP9.46□□□□□ -0.9
SDF2-208ENST00000589788 PLEKHB1Q9UF11 243 aaPredicted RBP9.46□□□□□ -0.9
SDF2-208ENST00000589788 PCDHGB4Q9UN71 923 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 FAF1Q9UNN5 650 aaPredicted RBP9.46□□□□□ -0.9
SDF2-208ENST00000589788 WIF1Q9Y5W5 379 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 DOPEY1Q5JWR5 2465 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 NUP214P35658 2090 aaPredicted RBP9.45□□□□□ -0.9
SDF2-208ENST00000589788 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 C15orf38-AP3S2A0A0A6YYH1 394 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 GXYLT2A0PJZ3 443 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 PRAMEF27A3QJZ7 478 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 MEGF11A6BM72 1044 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 SCO2O43819 266 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 DIAPH2O60879 1101 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 NKX2-2O95096 273 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 HMGN2P05204 90 aaKnown RBP9.45□□□□□ -0.9
SDF2-208ENST00000589788 KRT16P08779 473 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 ACP2P11117 423 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 EPHA3P29320 983 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 PTPN6P29350 595 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 EVI2BP34910 448 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 GCKP35557 465 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 PTGDSP41222 190 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 NME5P56597 212 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 LASP1Q14847 261 aaKnown RBP9.45□□□□□ -0.9
SDF2-208ENST00000589788 DPY19L1Q2PZI1 675 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 GXYLT1Q4G148 440 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 SLC9B1Q4ZJI4 515 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 ANXA8L1Q5VT79 327 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 FBXW10Q5XX13 1052 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 TMEM211Q6ICI0 200 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 OR4F3Q6IEY1 312 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 ZNF585AQ6P3V2 769 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 BHLHB9Q6PI77 547 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 MRGPRGQ86SM5 289 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 ZNF808Q8N4W9 903 aaPredicted RBP9.45□□□□□ -0.9
SDF2-208ENST00000589788 COX18Q8N8Q8 333 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 ANKS4BQ8N8V4 417 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 SLC16A11Q8NCK7 471 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 OR8J2Q8NGG1 315 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 OR5M9Q8NGP3 310 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 PSMA8Q8TAA3 256 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 SFXN5Q8TD22 340 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 ACTRT2Q8TDY3 377 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 HOXB13Q92826 284 aaPredicted RBP9.45□□□□□ -0.9
SDF2-208ENST00000589788 MOAP1Q96BY2 351 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 GIMAP5Q96F15 307 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 C16orf58Q96GQ5 468 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 EBF4Q9BQW3 602 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 CCDC28BQ9BUN5 200 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 UBQLN3Q9H347 655 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 CXorf36Q9H7Y0 433 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 TCF7L2Q9NQB0 619 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 SERHLQ9NQF3 203 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 SDHAF3Q9NRP4 125 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 PNPLA3Q9NST1 481 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 AIG1Q9NVV5 245 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 CRIM1Q9NZV1 1036 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 PPP4R1LQ9P1A2 415 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 TNFRSF10DQ9UBN6 386 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 REV1Q9UBZ9 1251 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 ABCG2Q9UNQ0 655 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 ARL2BPQ9Y2Y0 163 aa9.45□□□□□ -0.9
SDF2-208ENST00000589788 ASH1LQ9NR48 2969 aaKnown RBP9.45□□□□□ -0.9
SDF2-208ENST00000589788 PCNX1Q96RV3 2341 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 E9PBE3 544 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 RNASET2O00584 256 aaKnown RBP9.44□□□□□ -0.9
SDF2-208ENST00000589788 CBR3O75828 277 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 SOX30O94993 753 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 CLDN1O95832 211 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 HPNP05981 417 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 ALDOCP09972 364 aaKnown RBP9.44□□□□□ -0.9
SDF2-208ENST00000589788 ACVR2AP27037 513 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 S100A3P33764 101 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 MAP3K8P41279 467 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 HBA1P69905 142 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 POU6F2P78424 691 aaPredicted RBP9.44□□□□□ -0.9
SDF2-208ENST00000589788 ID3Q02535 119 aa9.44□□□□□ -0.9
SDF2-208ENST00000589788 STX5Q13190 355 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms