RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 GLYATQ6IB77 296 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 ASB18Q6ZVZ8 466 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 SLC26A7Q8TE54 656 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 WDR60Q8WVS4 1066 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 FAM162AQ96A26 154 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 CCDC124Q96CT7 223 aaKnown RBP13.91□□□□□ -0.18
ATG4D-211ENST00000589753 OSBPL11Q9BXB4 747 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 PCDHAC1Q9H158 963 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 MAGEL2Q9UJ55 1249 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 IFT52Q9Y366 437 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 DTNAQ9Y4J8 743 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 CSAG2Q9Y5P2 127 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 SNX13Q9Y5W8 968 aa13.91□□□□□ -0.18
ATG4D-211ENST00000589753 TRAV17A0A0B4J275 112 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 ANKRD33BA6NCL7 494 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 SERINC4A6NH21 518 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 ARPC2O15144 300 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 SCO2O43819 266 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 DPM1O60762 260 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 MFN2O95140 757 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 IFNA14P01570 189 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 THBS1P07996 1170 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 SP1P08047 785 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 PABPC4LP0CB38 370 aaKnown RBP13.9□□□□□ -0.18
ATG4D-211ENST00000589753 PTGDSP41222 190 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 TRIM25Q14258 630 aaKnown RBP13.9□□□□□ -0.18
ATG4D-211ENST00000589753 LARS2Q15031 903 aaKnown RBP13.9□□□□□ -0.18
ATG4D-211ENST00000589753 LIN52Q52LA3 116 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 LRRC23Q53EV4 343 aaPredicted RBP13.9□□□□□ -0.18
ATG4D-211ENST00000589753 ZNF766Q5HY98 468 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 ZNF311Q5JNZ3 666 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 SLC25A25Q6KCM7 469 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 SLC30A6Q6NXT4 461 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 APOOLQ6UXV4 268 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 MARCH3Q86UD3 253 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 VRK2Q86Y07 508 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 ARMC8Q8IUR7 673 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 TAMM41Q96BW9 452 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 ASB9Q96DX5 294 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 ANGPTL4Q9BY76 406 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 MUC13Q9H3R2 512 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 GALNT9Q9HCQ5 603 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 KLHL1Q9NR64 748 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.9□□□□□ -0.18
ATG4D-211ENST00000589753 SEC14L3Q9UDX4 400 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 ZNF232Q9UNY5 417 aa13.9□□□□□ -0.18
ATG4D-211ENST00000589753 ZNF443Q9Y2A4 671 aaPredicted RBP13.9□□□□□ -0.18
ATG4D-211ENST00000589753 KLF13Q9Y2Y9 288 aaPredicted RBP13.9□□□□□ -0.18
ATG4D-211ENST00000589753 CFAP47Q6ZTR5 3102 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 G3V3Y1 287 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 H3BNH8 94 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 NDUFB5O43674 189 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 NME2P1O60361 137 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 STAMBPO95630 424 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 ANGPTL1O95841 491 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 OPN1SWP03999 348 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 NID1P14543 1247 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 CNR1P21554 472 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 NME2P22392 152 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 RNF144AP50876 292 aaPredicted RBP13.89□□□□□ -0.19
ATG4D-211ENST00000589753 GAS1P54826 345 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 KCNJ2P63252 427 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 KCNJ10P78508 379 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 MS4A2Q01362 244 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 DMTNQ08495 405 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 FGFBP1Q14512 234 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 ZNF836Q6ZNA1 936 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 MISPQ8IVT2 679 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 GATSQ8NAP1 163 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 TMEM178AQ8NBL3 297 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 PHOSPHO1Q8TCT1 267 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 RASSF5Q8WWW0 418 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 SCMH1Q96GD3 660 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 DOHHQ9BU89 302 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 HES7Q9BYE0 225 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 RTN4RQ9BZR6 473 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 GORASP2Q9H8Y8 452 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 PROK2Q9HC23 129 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 ZNF71Q9NQZ8 489 aaPredicted RBP13.89□□□□□ -0.19
ATG4D-211ENST00000589753 SDHAF3Q9NRP4 125 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 ACTR3BQ9P1U1 418 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 SLC7A8Q9UHI5 535 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 PCDHGB6Q9Y5F9 930 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 WIF1Q9Y5W5 379 aa13.89□□□□□ -0.19
ATG4D-211ENST00000589753 ANKRD11Q6UB99 2663 aaPredicted RBP13.89□□□□□ -0.19
ATG4D-211ENST00000589753 TNRC6AQ8NDV7 1962 aaKnown RBP13.89□□□□□ -0.19
ATG4D-211ENST00000589753 C2orf72A6NCS6 295 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 ERVH48-1M5A8F1 160 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 ADAM10O14672 748 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 SNX4O95219 450 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 SERPINA1P01009 418 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 CSTAP01040 98 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 ENDOUP21128 410 aaKnown RBP13.88□□□□□ -0.19
ATG4D-211ENST00000589753 PRKAR1BP31321 381 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 ADH7P40394 386 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 DNASE1L1P49184 302 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 CRYBA2P53672 197 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 GPR85P60893 370 aa13.88□□□□□ -0.19
ATG4D-211ENST00000589753 TRAP1Q12931 704 aaKnown RBP13.88□□□□□ -0.19
ATG4D-211ENST00000589753 ELOAQ14241 798 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms