RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 GRAMD2AQ8IUY3 354 aa11.15□□□□□ -0.62
CCBE1-203ENST00000589116 CMIPQ8IY22 773 aa11.15□□□□□ -0.62
CCBE1-203ENST00000589116 C8orf59Q8N0T1 100 aaPredicted RBP11.15□□□□□ -0.62
CCBE1-203ENST00000589116 PARP8Q8N3A8 854 aa11.15□□□□□ -0.62
CCBE1-203ENST00000589116 BCORP1Q8N888 145 aa11.15□□□□□ -0.62
CCBE1-203ENST00000589116 ZSCAN1Q8NBB4 408 aa11.15□□□□□ -0.62
CCBE1-203ENST00000589116 TOR1AIP2Q8NFQ8 470 aa11.15□□□□□ -0.62
CCBE1-203ENST00000589116 OR4N2Q8NGD1 307 aa11.15□□□□□ -0.62
CCBE1-203ENST00000589116 DIO2Q92813 273 aa11.15□□□□□ -0.62
CCBE1-203ENST00000589116 LIN37Q96GY3 246 aaPredicted RBP11.15□□□□□ -0.62
CCBE1-203ENST00000589116 LCORQ96JN0 433 aaPredicted RBP11.15□□□□□ -0.62
CCBE1-203ENST00000589116 SPSB2Q99619 263 aa11.15□□□□□ -0.62
CCBE1-203ENST00000589116 NUDT9Q9BW91 350 aa11.15□□□□□ -0.62
CCBE1-203ENST00000589116 GRIP2Q9C0E4 1043 aa11.15□□□□□ -0.62
CCBE1-203ENST00000589116 SOX17Q9H6I2 414 aaPredicted RBP11.15□□□□□ -0.62
CCBE1-203ENST00000589116 PAPOLBQ9NRJ5 636 aaKnown RBP11.15□□□□□ -0.62
CCBE1-203ENST00000589116 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.15□□□□□ -0.62
CCBE1-203ENST00000589116 C19orf25Q9UFG5 118 aaPredicted RBP11.15□□□□□ -0.62
CCBE1-203ENST00000589116 PPIEQ9UNP9 301 aaKnown RBP11.15□□□□□ -0.62
CCBE1-203ENST00000589116 MGAT4BQ9UQ53 548 aa11.15□□□□□ -0.62
CCBE1-203ENST00000589116 GCN1Q92616 2671 aaKnown RBP11.15□□□□□ -0.63
CCBE1-203ENST00000589116 TRBV4-1A0A0J9YWV2 114 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 C2orf92A0A1B0GVN3 265 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 SAGE2PA6NJ88 616 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 C9J4A7 227 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 BCKDKO14874 412 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 TO15178 435 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 MITFO75030 526 aaPredicted RBP11.14□□□□□ -0.63
CCBE1-203ENST00000589116 ADAP00813 363 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 IGKV1D-16P01601 117 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 SLC5A2P31639 672 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 ATP12AP54707 1039 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 EMP2P54851 167 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 INSM1Q01101 510 aaPredicted RBP11.14□□□□□ -0.63
CCBE1-203ENST00000589116 ST3GAL3Q11203 375 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 TRAM2Q15035 370 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 CDCP2Q5VXM1 449 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 HLA-DQA1Q5Y7H0 255 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 TMEM154Q6P9G4 183 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 SHISA6Q6ZSJ9 500 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 PLEKHM3Q6ZWE6 761 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 GALNT5Q7Z7M9 940 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 ZNF321PQ8N8H1 164 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 AQP11Q8NBQ7 271 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 SETD9Q8NE22 299 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 OR9Q2Q8NGE9 314 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 ADIPOR1Q96A54 375 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 MCHR1Q99705 422 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 CRB3Q9BUF7 120 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 YTHDF1Q9BYJ9 559 aaKnown RBP11.14□□□□□ -0.63
CCBE1-203ENST00000589116 ULBP3Q9BZM4 244 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 HOXD1Q9GZZ0 328 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 RIBC2Q9H4K1 309 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 MAN2C1Q9NTJ4 1040 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 RLIMQ9NVW2 624 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 TESQ9UGI8 421 aaKnown RBP11.14□□□□□ -0.63
CCBE1-203ENST00000589116 GPN3Q9UHW5 284 aaPredicted RBP11.14□□□□□ -0.63
CCBE1-203ENST00000589116 MYRFQ9Y2G1 1151 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 LOXL2Q9Y4K0 774 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 PCDHGB5Q9Y5G0 923 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 HSPE1-MOB4S4R3N1 261 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 NPIPA5A0A0B4J1W7 369 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 SH3PXD2BA1X283 911 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 CLDN24A6NM45 220 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 C4orf47A7E2U8 309 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 NPIPA7E9PJI5 369 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 TM4SF5O14894 197 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 FRS3O43559 492 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 TPST2O60704 377 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 IL33O95760 270 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 CLIC3O95833 236 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 NPIPA8P0DM63 369 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 CDK4P11802 303 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 ZNF28P17035 718 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 SPINK2P20155 84 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 RFX3P48380 749 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 GPR143P51810 404 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 ZNF136P52737 540 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 TPD52P55327 224 aaPredicted RBP11.14□□□□□ -0.63
CCBE1-203ENST00000589116 IL1RL1Q01638 556 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 NPRL3Q12980 569 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 FGFBP1Q14512 234 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 NNATQ16517 81 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 ISXQ2M1V0 245 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 ENTPD8Q5MY95 495 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 PDZK1Q5T2W1 519 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 DCAF12Q5T6F0 453 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 STPG1Q5TH74 334 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 ZNF691Q5VV52 312 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 TTC33Q6PID6 262 aaPredicted RBP11.14□□□□□ -0.63
CCBE1-203ENST00000589116 TMEM205Q6UW68 189 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 ZNF517Q6ZMY9 492 aaPredicted RBP11.14□□□□□ -0.63
CCBE1-203ENST00000589116 THAP5Q7Z6K1 395 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 C9orf40Q8IXQ3 194 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 B3GNT7Q8NFL0 401 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 SLC7A13Q8TCU3 470 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 SLC38A4Q969I6 547 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 HSPBAP1Q96EW2 488 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 MUS81Q96NY9 551 aa11.14□□□□□ -0.63
CCBE1-203ENST00000589116 PITX2Q99697 317 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms