RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 KIAA0513O60268 411 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 ANGPTL1O95841 491 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 BCHEP06276 602 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 DBIP07108 87 aaKnown RBP17.89■□□□□ 0.45
CIRBP-220ENST00000588917 MSX1P28360 303 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 ADH7P40394 386 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 PTGDSP41222 190 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 PSME3P61289 254 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 ALDH6A1Q02252 535 aaKnown RBP17.89■□□□□ 0.45
CIRBP-220ENST00000588917 FUT5Q11128 374 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 ZSWIM7Q19AV6 140 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 BICRALQ6AI39 1079 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 TIGD3Q6B0B8 471 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 C8orf82Q6P1X6 216 aaPredicted RBP17.89■□□□□ 0.45
CIRBP-220ENST00000588917 ERICH5Q6P6B1 374 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 C16orf89Q6UX73 402 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 FRRS1Q6ZNA5 592 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 NET1Q7Z628 596 aaPredicted RBP17.89■□□□□ 0.45
CIRBP-220ENST00000588917 ZAR1Q86SH2 424 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 KRT73Q86Y46 540 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 PLCZ1Q86YW0 608 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 PEX5LQ8IYB4 626 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 BBS10Q8TAM1 723 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 DUSP19Q8WTR2 217 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 TMEM19Q96HH6 336 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 TREX2Q9BQ50 279 aaPredicted RBP17.89■□□□□ 0.45
CIRBP-220ENST00000588917 SPATA5L1Q9BVQ7 753 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 SLC38A1Q9H2H9 487 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.89■□□□□ 0.45
CIRBP-220ENST00000588917 QPCTLQ9NXS2 382 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 TUBA8Q9NY65 449 aaPredicted RBP17.89■□□□□ 0.45
CIRBP-220ENST00000588917 PPP4R1LQ9P1A2 415 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 COL12A1Q99715 3063 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 B2RBV5 119 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 DNAJA2O60884 412 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 UGT2B17O75795 530 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 CHRM4P08173 479 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 NUDT7P0C024 238 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 ETS2P15036 469 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 GAS1P54826 345 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 PPIAP62937 165 aaKnown RBP17.88■□□□□ 0.45
CIRBP-220ENST00000588917 CBX1P83916 185 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 FOXO1Q12778 655 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 SELPLGQ14242 412 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 INPP5JQ15735 1006 aaPredicted RBP17.88■□□□□ 0.45
CIRBP-220ENST00000588917 ADRM1Q16186 407 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 RABL3Q5HYI8 236 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 INTS11Q5TA45 600 aaKnown RBP17.88■□□□□ 0.45
CIRBP-220ENST00000588917 MARCH3Q86UD3 253 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 SLC15A3Q8IY34 581 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 HIPK4Q8NE63 616 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 FAR1Q8WVX9 515 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 SNRNP40Q96DI7 357 aaKnown RBP17.88■□□□□ 0.45
CIRBP-220ENST00000588917 TAAR6Q96RI8 345 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 ZNF607Q96SK3 696 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 TTTY12Q9BZ98 90 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 ARMC7Q9H6L4 198 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 PTGES2Q9H7Z7 377 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 GALNT9Q9HCQ5 603 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 SPAG4Q9NPE6 437 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 ANGPT4Q9Y264 503 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 IFT52Q9Y366 437 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 PTPN13Q12923 2485 aa17.88■□□□□ 0.45
CIRBP-220ENST00000588917 FLNCQ14315 2725 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 AGAP5A6NIR3 686 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 GTPBP1O00178 669 aaKnown RBP17.87■□□□□ 0.45
CIRBP-220ENST00000588917 SNPHO15079 494 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 SCO2O43819 266 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 SERPINB7O75635 380 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 GLSO94925 669 aaPredicted RBP17.87■□□□□ 0.45
CIRBP-220ENST00000588917 PGM3O95394 542 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 CBX6O95503 412 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 IL7RP16871 459 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 ZNF24P17028 368 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 CPA2P48052 419 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 SCARB2Q14108 478 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 VEZF1Q14119 521 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 VMACQ2NL98 169 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 KRTCAP3Q53RY4 240 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 COLEC12Q5KU26 742 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 APOOLQ6UXV4 268 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 EIF3MQ7L2H7 374 aaKnown RBP17.87■□□□□ 0.45
CIRBP-220ENST00000588917 CALHM3Q86XJ0 350 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 CMIPQ8IY22 773 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 PGAM4Q8N0Y7 254 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 TNIP2Q8NFZ5 429 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 NFKBIDQ8NI38 313 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 PHOSPHO1Q8TCT1 267 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 MAL2Q969L2 176 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 REXO5Q96IC2 774 aaKnown RBP17.87■□□□□ 0.45
CIRBP-220ENST00000588917 ZNF583Q96ND8 569 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 OLAHQ9NV23 265 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 FLRT3Q9NZU0 649 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 SLC35A3Q9Y2D2 325 aa17.87■□□□□ 0.45
CIRBP-220ENST00000588917 PINLYPA6NC86 204 aa17.86■□□□□ 0.45
CIRBP-220ENST00000588917 C2orf72A6NCS6 295 aa17.86■□□□□ 0.45
CIRBP-220ENST00000588917 SERINC4A6NH21 518 aa17.86■□□□□ 0.45
CIRBP-220ENST00000588917 GNB5O14775 395 aa17.86■□□□□ 0.45
CIRBP-220ENST00000588917 TFECO14948 347 aaPredicted RBP17.86■□□□□ 0.45
CIRBP-220ENST00000588917 EIF4E2O60573 245 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms