RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 UMODP07911 640 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 CCNYL3P0C7X3 344 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 UBTFL6P0CB48 400 aaPredicted RBP10.52□□□□□ -0.72
SMAD4-205ENST00000588745 ITGAMP11215 1152 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 ANXA8P13928 327 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 CBLP22681 906 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 LCN1P31025 176 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 IFNA8P32881 189 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 RNF144AP50876 292 aaPredicted RBP10.52□□□□□ -0.72
SMAD4-205ENST00000588745 RNF4P78317 190 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 PLCXD2Q0VAA5 305 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 KCNAB2Q13303 367 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 ZSWIM7Q19AV6 140 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 ENTPD8Q5MY95 495 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 DCST1Q5T197 706 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 SWT1Q5T5J6 900 aaKnown RBP10.52□□□□□ -0.72
SMAD4-205ENST00000588745 TTC23Q5W5X9 447 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 ZNF770Q6IQ21 691 aaPredicted RBP10.52□□□□□ -0.72
SMAD4-205ENST00000588745 KRT80Q6KB66 452 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 C6orf15Q6UXA7 325 aaPredicted RBP10.52□□□□□ -0.72
SMAD4-205ENST00000588745 PLEKHM3Q6ZWE6 761 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 USP51Q70EK9 711 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 GALNT5Q7Z7M9 940 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 GRAMD2AQ8IUY3 354 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 CMIPQ8IY22 773 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 SLC34A3Q8N130 599 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 SLC5A8Q8N695 610 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 ZNF555Q8NEP9 628 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 OR2Y1Q8NGV0 311 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 WDR36Q8NI36 951 aaKnown RBP10.52□□□□□ -0.72
SMAD4-205ENST00000588745 GATA6Q92908 595 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 SLC35B4Q969S0 331 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 HSPBAP1Q96EW2 488 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 FEVQ99581 238 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 POLR2J2Q9GZM3 115 aaKnown RBP10.52□□□□□ -0.72
SMAD4-205ENST00000588745 NRSN2Q9GZP1 204 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 HOXD1Q9GZZ0 328 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 POLR2J3Q9H1A7 115 aaKnown RBP10.52□□□□□ -0.72
SMAD4-205ENST00000588745 ANKRD19PQ9H560 264 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 CTPS2Q9NRF8 586 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.52□□□□□ -0.72
SMAD4-205ENST00000588745 MAN2C1Q9NTJ4 1040 aa10.52□□□□□ -0.72
SMAD4-205ENST00000588745 DNAJB12Q9NXW2 375 aaKnown RBP10.52□□□□□ -0.72
SMAD4-205ENST00000588745 PTRH2Q9Y3E5 179 aaKnown RBP10.52□□□□□ -0.72
SMAD4-205ENST00000588745 MUC6Q6W4X9 2439 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 LOC102723996A0A087X1L8 192 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.52□□□□□ -0.73
SMAD4-205ENST00000588745 CDC14CA4D256 554 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 MAGEA13PA6NCF6 341 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 C9orf172C9J069 976 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 FMO6PO60774 539 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 BCAS1O75363 584 aaPredicted RBP10.52□□□□□ -0.73
SMAD4-205ENST00000588745 KLF7O75840 302 aaPredicted RBP10.52□□□□□ -0.73
SMAD4-205ENST00000588745 ADAP00813 363 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 CD63P08962 238 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 GNAO1P09471 354 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 FTH1P19P0C7X4 201 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 FOLR3P41439 243 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 NR0B1P51843 470 aaKnown RBP10.52□□□□□ -0.73
SMAD4-205ENST00000588745 CHN2P52757 468 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 LIMK1P53667 647 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 SLC26A5P58743 744 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 HOXC5Q00444 222 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 IL1RL1Q01638 556 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 ST3GAL3Q11203 375 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 TRAM2Q15035 370 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 PCOLCEQ15113 449 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 SEC23BQ15437 767 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 C3orf38Q5JPI3 329 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 TMEM164Q5U3C3 297 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 HSDL2Q6YN16 418 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 AQP11Q8NBQ7 271 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 NUBPLQ8TB37 319 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 SLC7A13Q8TCU3 470 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 ADAMTS16Q8TE57 1224 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 CNOT9Q92600 299 aaKnown RBP10.52□□□□□ -0.73
SMAD4-205ENST00000588745 TP53INP1Q96A56 240 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 C8orf44Q96CB5 159 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 PRR14Q9BWN1 585 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 GABARAPL3Q9BY60 117 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 SPRY4Q9C004 299 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 RIBC2Q9H4K1 309 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 PAPOLBQ9NRJ5 636 aaKnown RBP10.52□□□□□ -0.73
SMAD4-205ENST00000588745 PNPLA3Q9NST1 481 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 FAM118AQ9NWS6 357 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 FOXJ2Q9P0K8 574 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 POFUT2Q9Y2G5 429 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 PCDHGB5Q9Y5G0 923 aa10.52□□□□□ -0.73
SMAD4-205ENST00000588745 TRBV11-1A0A0K0K1C0 115 aa10.51□□□□□ -0.73
SMAD4-205ENST00000588745 SH3PXD2BA1X283 911 aa10.51□□□□□ -0.73
SMAD4-205ENST00000588745 SERINC4A6NH21 518 aa10.51□□□□□ -0.73
SMAD4-205ENST00000588745 SLC16A6O15403 523 aa10.51□□□□□ -0.73
SMAD4-205ENST00000588745 OR10H3O60404 316 aa10.51□□□□□ -0.73
SMAD4-205ENST00000588745 TSPAN2O60636 221 aa10.51□□□□□ -0.73
SMAD4-205ENST00000588745 CYP7B1O75881 506 aa10.51□□□□□ -0.73
SMAD4-205ENST00000588745 CLIC3O95833 236 aa10.51□□□□□ -0.73
SMAD4-205ENST00000588745 IGHEP01854 428 aa10.51□□□□□ -0.73
SMAD4-205ENST00000588745 LYNP07948 512 aa10.51□□□□□ -0.73
SMAD4-205ENST00000588745 RAB40ALP0C0E4 278 aa10.51□□□□□ -0.73
SMAD4-205ENST00000588745 GKN3PP0CG01 181 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms