RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 TXNL4AP83876 142 aaKnown RBP18.37■□□□□ 0.53
DDX39A-207ENST00000588542 C17orf67Q0P5P2 114 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 UBAP2LQ14157 1087 aaKnown RBP18.37■□□□□ 0.53
DDX39A-207ENST00000588542 TOMM20Q15388 145 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 CD226Q15762 336 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 WIPI1Q5MNZ9 446 aaPredicted RBP18.37■□□□□ 0.53
DDX39A-207ENST00000588542 ATAD3BQ5T9A4 648 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 RETREG3Q86VR2 466 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 FAM26EQ8N5C1 309 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 GATSQ8NAP1 163 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 OR4K17Q8NGC6 315 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 TSPEARQ8WU66 669 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 ROPN1LQ96C74 230 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 HOXD1Q9GZZ0 328 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 SAP130Q9H0E3 1048 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 SH3BGRL2Q9UJC5 107 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 MKLN1Q9UL63 735 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 MRPS18CQ9Y3D5 142 aaKnown RBP18.37■□□□□ 0.53
DDX39A-207ENST00000588542 UTP20O75691 2785 aaKnown RBP18.37■□□□□ 0.53
DDX39A-207ENST00000588542 NCOA6Q14686 2063 aaPredicted RBP18.37■□□□□ 0.53
DDX39A-207ENST00000588542 NDUFB5O43674 189 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 ZIC3O60481 467 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 TPOP07202 933 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 RNF224P0DH78 156 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 ETFAP13804 333 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 DRD4P21917 467 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 SRD5A2P31213 254 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 KLF10Q13118 480 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 MAPK11Q15759 364 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 SYPL1Q16563 259 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 TYW3Q6IPR3 259 aaKnown RBP18.36■□□□□ 0.53
DDX39A-207ENST00000588542 DLEU7Q6UYE1 221 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 FRRS1Q6ZNA5 592 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 CD163Q86VB7 1156 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 FJX1Q86VR8 437 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 PCNX1Q96RV3 2341 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 NMUR2Q9GZQ4 415 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 EXO5Q9H790 373 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 FAM53CQ9NYF3 392 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 VAPAQ9P0L0 249 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 LEF1Q9UJU2 399 aaPredicted RBP18.36■□□□□ 0.53
DDX39A-207ENST00000588542 SLC6A5Q9Y345 797 aa18.36■□□□□ 0.53
DDX39A-207ENST00000588542 CENPVL1A0A0U1RR11 272 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 A0A1B0GUH1 482 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 CLIC1O00299 241 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 PRRG2O14669 202 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 KIAA0513O60268 411 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 AGFG2O95081 481 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 SNRPB2P08579 225 aaKnown RBP18.35■□□□□ 0.53
DDX39A-207ENST00000588542 HPGDP15428 266 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 DPP4P27487 766 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 RNF144AP50876 292 aaPredicted RBP18.35■□□□□ 0.53
DDX39A-207ENST00000588542 ANXA11P50995 505 aaKnown RBP18.35■□□□□ 0.53
DDX39A-207ENST00000588542 DSCR4P56555 118 aaPredicted RBP18.35■□□□□ 0.53
DDX39A-207ENST00000588542 GNGT1P63211 74 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 GPR68Q15743 365 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 ZNF141Q15928 474 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 GXYLT1Q4G148 440 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 NHSL2Q5HYW2 709 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 DPP10Q8N608 796 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 ANKFN1Q8N957 763 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 ZNF527Q8NB42 609 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 OR5M9Q8NGP3 310 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 ELAC2Q9BQ52 826 aaKnown RBP18.35■□□□□ 0.53
DDX39A-207ENST00000588542 KLHDC3Q9BQ90 382 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 POLE3Q9NRF9 147 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 PNPLA3Q9NST1 481 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 TAS2R10Q9NYW0 307 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 LIPT1Q9Y234 373 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 NDUFAF1Q9Y375 327 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 WDR45Q9Y484 360 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 GMEB1Q9Y692 573 aa18.35■□□□□ 0.53
DDX39A-207ENST00000588542 DOPEY2Q9Y3R5 2298 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 GMNCA6NCL1 334 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 WIPF3A6NGB9 483 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 CCL21O00585 134 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 BCKDKO14874 412 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 OIP5O43482 229 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 UGT2B17O75795 530 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 H6PDO95479 791 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 LDLRP01130 860 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 CHRM4P08173 479 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 CRATP43155 626 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 GFRA1P56159 465 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 CHRNEQ04844 493 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 CRYZQ08257 329 aaKnown RBP18.34■□□□□ 0.53
DDX39A-207ENST00000588542 RGNQ15493 299 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 MAPK14Q16539 360 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 GPAT3Q53EU6 434 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 PDZK1Q5T2W1 519 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 VASNQ6EMK4 673 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 C3P1Q6ZMU1 363 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 SPATA21Q7Z572 469 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 MTERF4Q7Z6M4 381 aaKnown RBP18.34■□□□□ 0.53
DDX39A-207ENST00000588542 MISPQ8IVT2 679 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 OR14L1PQ8NHC6 308 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 SARAFQ96BY9 339 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 ZG16BQ96DA0 208 aa18.34■□□□□ 0.53
DDX39A-207ENST00000588542 TRNT1Q96Q11 434 aaKnown RBP18.34■□□□□ 0.53
DDX39A-207ENST00000588542 SLC38A1Q9H2H9 487 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms