RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 GRAMD1BQ3KR37 738 aa12.57□□□□□ -0.4
DNMT1-213ENST00000587604 IKBIPQ70UQ0 350 aa12.57□□□□□ -0.4
DNMT1-213ENST00000587604 TRIM46Q7Z4K8 759 aa12.57□□□□□ -0.4
DNMT1-213ENST00000587604 STK32CQ86UX6 486 aa12.57□□□□□ -0.4
DNMT1-213ENST00000587604 WFDC8Q8IUA0 241 aa12.57□□□□□ -0.4
DNMT1-213ENST00000587604 C17orf53Q8N3J3 647 aaPredicted RBP12.57□□□□□ -0.4
DNMT1-213ENST00000587604 GTPBP8Q8N3Z3 284 aaPredicted RBP12.57□□□□□ -0.4
DNMT1-213ENST00000587604 MMGT1Q8N4V1 131 aa12.57□□□□□ -0.4
DNMT1-213ENST00000587604 ACTRT2Q8TDY3 377 aa12.57□□□□□ -0.4
DNMT1-213ENST00000587604 HOXB13Q92826 284 aaPredicted RBP12.57□□□□□ -0.4
DNMT1-213ENST00000587604 ZBTB8AQ96BR9 441 aa12.57□□□□□ -0.4
DNMT1-213ENST00000587604 GSTO2Q9H4Y5 243 aa12.57□□□□□ -0.4
DNMT1-213ENST00000587604 MID1IP1Q9NPA3 183 aa12.57□□□□□ -0.4
DNMT1-213ENST00000587604 ALPK2Q86TB3 2170 aa12.57□□□□□ -0.4
DNMT1-213ENST00000587604 C7orf72A4D263 438 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 UBFD1O14562 309 aaKnown RBP12.56□□□□□ -0.4
DNMT1-213ENST00000587604 NDUFB5O43674 189 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 CXCL13O43927 109 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 SOX30O94993 753 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 SYNGR4O95473 234 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 NGFRP08138 427 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 PRPS2P11908 318 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 PSMB1P20618 241 aaKnown RBP12.56□□□□□ -0.4
DNMT1-213ENST00000587604 PSMA4P25789 261 aaKnown RBP12.56□□□□□ -0.4
DNMT1-213ENST00000587604 GCAP28676 217 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 ECHS1P30084 290 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 SLC29A2Q14542 456 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 IMPG1Q17R60 797 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 VPS26BQ4G0F5 336 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 CPTPQ5TA50 214 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 GTF2IRD2BQ6EKJ0 949 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 ADAM5Q6NVV9 412 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 NOXRED1Q6NXP6 359 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 ESPNLQ6ZVH7 1005 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 GTF2IRD2Q86UP8 949 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 EXOC3L1Q86VI1 746 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 OR4C3Q8NH37 302 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 GPR151Q8TDV0 419 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 PIK3R3Q92569 461 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 SLC9A6Q92581 669 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 AKAP1Q92667 903 aaKnown RBP eCLIP12.56□□□□□ -0.4
DNMT1-213ENST00000587604 HDHD5Q9BXW7 423 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 LAMP3Q9UQV4 416 aa12.56□□□□□ -0.4
DNMT1-213ENST00000587604 POLR3HQ9Y535 204 aaPredicted RBP12.56□□□□□ -0.4
DNMT1-213ENST00000587604 NUP214P35658 2090 aaPredicted RBP12.55□□□□□ -0.4
DNMT1-213ENST00000587604 A0A0J9YW62 118 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 A0A1W2PRB8 838 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 H3BQF6 201 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 TNFSF11O14788 317 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 NKX2-2O95096 273 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 OXSR1O95747 527 aaPredicted RBP12.55□□□□□ -0.4
DNMT1-213ENST00000587604 OPN1LWP04000 364 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 RPS4XP62701 263 aaKnown RBP12.55□□□□□ -0.4
DNMT1-213ENST00000587604 GLE1Q53GS7 698 aaKnown RBP12.55□□□□□ -0.4
DNMT1-213ENST00000587604 PDSS1Q5T2R2 415 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 MFSD12Q6NUT3 480 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 ZNF551Q7Z340 670 aaPredicted RBP12.55□□□□□ -0.4
DNMT1-213ENST00000587604 GALNT10Q86SR1 603 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 CCNYL1Q8N7R7 359 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 CDRT4Q8N9R6 151 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 STEAP2Q8NFT2 490 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 OR2V1Q8NHB1 315 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 CEP70Q8NHQ1 597 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 OSTF1Q92882 214 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 METTL2AQ96IZ6 378 aaKnown RBP12.55□□□□□ -0.4
DNMT1-213ENST00000587604 NPAS1Q99742 590 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 IQCGQ9H095 443 aaKnown RBP12.55□□□□□ -0.4
DNMT1-213ENST00000587604 EQTNQ9NQ60 294 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 RRAGDQ9NQL2 400 aaPredicted RBP12.55□□□□□ -0.4
DNMT1-213ENST00000587604 MED17Q9NVC6 651 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 CR1P17927 2039 aa12.55□□□□□ -0.4
DNMT1-213ENST00000587604 GOLGA8RI6L899 631 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 OVOL3O00110 214 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 RSL1D1O76021 490 aaKnown RBP12.54□□□□□ -0.4
DNMT1-213ENST00000587604 TUBBP07437 444 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 GSTA1P08263 222 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 ABHD2P08910 425 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 PABPC4LP0CB38 370 aaKnown RBP12.54□□□□□ -0.4
DNMT1-213ENST00000587604 NID1P14543 1247 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 ME2P23368 584 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 AGTR1P30556 359 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 ZNF41P51814 821 aaPredicted RBP12.54□□□□□ -0.4
DNMT1-213ENST00000587604 CARD18P57730 90 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 NAA20P61599 178 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 SLC18A2Q05940 514 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 KRTAP1-1Q07627 177 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 HSPB3Q12988 150 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 KIAA0040Q15053 153 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 ETFDHQ16134 617 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 WHAMMP3Q1A5X7 153 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 CLEC12BQ2HXU8 276 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 PLPPR5Q32ZL2 321 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 HBMQ6B0K9 141 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 HEPHL1Q6MZM0 1159 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 MISPQ8IVT2 679 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 OR6Y1Q8NGX8 325 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 RAB3IL1Q8TBN0 382 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 FAM110BQ8TC76 370 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 ACMSDQ8TDX5 336 aa12.54□□□□□ -0.4
DNMT1-213ENST00000587604 S100PBPQ96BU1 408 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms