RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 RNH1P13489 461 aaKnown RBP9.55□□□□□ -0.88
RFFL-212ENST00000584655 DRD2P14416 443 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 ACVR1BP36896 505 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 GSTM5P46439 218 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 RPS18P62269 152 aaKnown RBP9.55□□□□□ -0.88
RFFL-212ENST00000584655 CPOQ8IVL8 374 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 SYT14Q8NB59 555 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 SDR9C7Q8NEX9 313 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 C16orf52Q8NHV5 167 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 IPCEF1Q8WWN9 437 aaPredicted RBP9.55□□□□□ -0.88
RFFL-212ENST00000584655 TRIM45Q9H8W5 580 aaPredicted RBP9.55□□□□□ -0.88
RFFL-212ENST00000584655 SLC2A4RGQ9NR83 387 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 POT1Q9NUX5 634 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 SCML1Q9UN30 329 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 HEATR5AQ86XA9 2040 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 TMEM265A0A087WTH1 108 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 CDC42EP2O14613 210 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 SEMA3DO95025 777 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 TFPIP10646 304 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 CCL4P13236 92 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 GTF2E2P29084 291 aaKnown RBP9.55□□□□□ -0.88
RFFL-212ENST00000584655 COPZ1P61923 177 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 POU6F2P78424 691 aaPredicted RBP9.55□□□□□ -0.88
RFFL-212ENST00000584655 HLA-BQ31612 363 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 ZNF691Q5VV52 312 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 METTL2BQ6P1Q9 378 aaKnown RBP9.55□□□□□ -0.88
RFFL-212ENST00000584655 ZNF773Q6PK81 442 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 RPTNQ6XPR3 784 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 TRIM69Q86WT6 500 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 SLC30A8Q8IWU4 369 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 CA13Q8N1Q1 262 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 GPBAR1Q8TDU6 330 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 GGHQ92820 318 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 SLC41A3Q96GZ6 507 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 SHDQ96IW2 340 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 ZNF354BQ96LW1 612 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 SDF2Q99470 211 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 CUTCQ9NTM9 273 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 ASIC5Q9NY37 505 aa9.55□□□□□ -0.88
RFFL-212ENST00000584655 ZNF99A8MXY4 864 aaPredicted RBP9.54□□□□□ -0.88
RFFL-212ENST00000584655 MYL12BO14950 172 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 AIREO43918 545 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 WBP4O75554 376 aaKnown RBP9.54□□□□□ -0.88
RFFL-212ENST00000584655 PIAS2O75928 621 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 NCR1O76036 304 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 PPP1R3DO95685 299 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 CSF2P04141 144 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 SOX18P35713 384 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 KCNJ5P48544 419 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 BMXP51813 675 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 YPEL5P62699 121 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 PDE7AQ13946 482 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 IQCCQ4KMZ1 466 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 KDM4DQ6B0I6 523 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 SLC38A9Q8NBW4 561 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 OR1L3Q8NH93 324 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 ZMYND19Q96E35 227 aaPredicted RBP9.54□□□□□ -0.88
RFFL-212ENST00000584655 SERINC2Q96SA4 455 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 NXF5Q9H1B4 397 aaKnown RBP9.54□□□□□ -0.88
RFFL-212ENST00000584655 GALNT9Q9HCQ5 603 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 MRPS33Q9Y291 106 aaKnown RBP9.54□□□□□ -0.88
RFFL-212ENST00000584655 PCDHGA10Q9Y5H3 936 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 PKDREJQ9NTG1 2253 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 ANKRD11Q6UB99 2663 aaPredicted RBP9.54□□□□□ -0.88
RFFL-212ENST00000584655 KIR2DS5A0A0G2JLQ3 304 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 A0A0G2JNG1 304 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 KIR2DS3K7RE56 304 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 ABCB7O75027 752 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 ADAM11O75078 769 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 CELA2AP08217 269 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 BMP7P18075 431 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 RHCEP18577 417 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 NUP107P57740 925 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 AQP6Q13520 282 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 KIR2DS5Q14953 304 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 ALG10BQ5I7T1 473 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 C1QL3Q5VWW1 255 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 ZNF836Q6ZNA1 936 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 ZNF554Q86TJ5 538 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 P2RY8Q86VZ1 359 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 OR56A1Q8NGH5 318 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 CEP76Q8TAP6 659 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 GAB3Q8WWW8 586 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 KLHL6Q8WZ60 621 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 NELL2Q99435 816 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 CENPOQ9BU64 300 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 RACGAP1Q9H0H5 632 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 PHF11Q9UIL8 331 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 PDE9AO76083 593 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 CELP19835 753 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 EEF1A2Q05639 463 aaKnown RBP9.54□□□□□ -0.88
RFFL-212ENST00000584655 SLC3A1Q07837 685 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 DDI2Q5TDH0 399 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 MARCH3Q86UD3 253 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 SEMA6CQ9H3T2 930 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 C14orf119Q9NWQ9 140 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 KCNE5Q9UJ90 142 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 PPIEQ9UNP9 301 aaKnown RBP9.54□□□□□ -0.88
RFFL-212ENST00000584655 SLC22A7Q9Y694 548 aa9.54□□□□□ -0.88
RFFL-212ENST00000584655 PRICKLE3O43900 615 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms