RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 WWP2O00308 870 aa2.47□□□□□ -2.01
COPS3-217ENST00000583160 MAGEB4O15481 346 aaPredicted RBP2.47□□□□□ -2.01
COPS3-217ENST00000583160 BBOX1O75936 387 aa2.47□□□□□ -2.01
COPS3-217ENST00000583160 MAT2AP31153 395 aaKnown RBP2.47□□□□□ -2.01
COPS3-217ENST00000583160 SERPINH1P50454 418 aaKnown RBP2.47□□□□□ -2.01
COPS3-217ENST00000583160 ASIC1P78348 528 aa2.47□□□□□ -2.01
COPS3-217ENST00000583160 MAP2K1Q02750 393 aaPredicted RBP2.47□□□□□ -2.01
COPS3-217ENST00000583160 SMC1AQ14683 1233 aaKnown RBP2.47□□□□□ -2.01
COPS3-217ENST00000583160 PARP10Q53GL7 1025 aa2.47□□□□□ -2.01
COPS3-217ENST00000583160 TMEM179BQ7Z7N9 219 aa2.47□□□□□ -2.01
COPS3-217ENST00000583160 NBPF5PQ86XG9 351 aaPredicted RBP2.47□□□□□ -2.01
COPS3-217ENST00000583160 PYROXD2Q8N2H3 581 aa2.47□□□□□ -2.01
COPS3-217ENST00000583160 LHX4Q969G2 390 aa2.47□□□□□ -2.01
COPS3-217ENST00000583160 DHTKD1Q96HY7 919 aaPredicted RBP2.47□□□□□ -2.01
COPS3-217ENST00000583160 CFAP53Q96M91 514 aa2.47□□□□□ -2.01
COPS3-217ENST00000583160 Q9H3A6 140 aa2.47□□□□□ -2.01
COPS3-217ENST00000583160 DCLRE1BQ9H816 532 aa2.47□□□□□ -2.01
COPS3-217ENST00000583160 ACOXLQ9NUZ1 547 aa2.47□□□□□ -2.01
COPS3-217ENST00000583160 ERVK-18Q9QC07 812 aa2.47□□□□□ -2.01
COPS3-217ENST00000583160 ZNF221Q9UK13 617 aa2.47□□□□□ -2.01
COPS3-217ENST00000583160 ATP6V0A2Q9Y487 856 aa2.47□□□□□ -2.01
COPS3-217ENST00000583160 DUOX1Q9NRD9 1551 aa2.47□□□□□ -2.01
COPS3-217ENST00000583160 SCN9AQ15858 1988 aa2.47□□□□□ -2.01
COPS3-217ENST00000583160 MYH3P11055 1940 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 AKAP11Q9UKA4 1901 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 UBN2Q6ZU65 1347 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 A4D1N5 150 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 TCP11X1B4DZS4 312 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 OR7A17O14581 309 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 TIMM44O43615 452 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 STX6O43752 255 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 ECDO95905 644 aaPredicted RBP2.46□□□□□ -2.02
COPS3-217ENST00000583160 PSG2P11465 335 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 VDRP11473 427 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 VCLP18206 1134 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 FCARP24071 287 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 EPHX2P34913 555 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 ACVR1BP36896 505 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 POU3F4P49335 361 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 SNU13P55769 128 aaKnown RBP2.46□□□□□ -2.02
COPS3-217ENST00000583160 LRRC63Q05C16 580 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 NPRL3Q12980 569 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 DEFB115Q30KQ5 88 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 HSP90AB3PQ58FF7 597 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 TFDP3Q5H9I0 405 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 LGSNQ5TDP6 509 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 PRAMEF8Q5VWM4 474 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 CST9Q5W186 159 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 LINC00696Q6ZRV3 163 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 GALNTL5Q7Z4T8 443 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 C9orf40Q8IXQ3 194 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 OR8H3Q8N146 312 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 DNAJA3Q96EY1 480 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 ACCSQ96QU6 501 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 APOOQ9BUR5 198 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 SLC25A39Q9BZJ4 359 aaPredicted RBP2.46□□□□□ -2.02
COPS3-217ENST00000583160 EXOSC3Q9NQT5 275 aaKnown RBP2.46□□□□□ -2.02
COPS3-217ENST00000583160 NRBP1Q9UHY1 535 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 RAB26Q9ULW5 256 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 ABCC12Q96J65 1359 aa2.46□□□□□ -2.02
COPS3-217ENST00000583160 RBBP6Q7Z6E9 1792 aaKnown RBP2.46□□□□□ -2.02
COPS3-217ENST00000583160 CASP8AP2Q9UKL3 1982 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 ECM29Q5VYK3 1845 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 PDE4DIPQ5VU43 2346 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 A0A0J9YVX5 310 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 PDLIM1O00151 329 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 PGK1P00558 417 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 SFTPBP07988 381 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 RPS12P25398 132 aaKnown RBP2.45□□□□□ -2.02
COPS3-217ENST00000583160 RAG2P55895 527 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 PUDPQ08623 228 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 BNIP1Q12981 228 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 IL18R1Q13478 541 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 AGBL2Q5U5Z8 902 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 MEDAGQ5VYS4 303 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 TRPM8Q7Z2W7 1104 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 PPP1R42Q7Z4L9 355 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 TSEN54Q7Z6J9 526 aaKnown RBP2.45□□□□□ -2.02
COPS3-217ENST00000583160 SYCP3Q8IZU3 236 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 OR10H4Q8NGA5 316 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 RAB39BQ96DA2 213 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 TM2D1Q9BX74 207 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 ALG9Q9H6U8 611 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 CYTL1Q9NRR1 136 aa2.45□□□□□ -2.02
COPS3-217ENST00000583160 FOXA2Q9Y261 457 aaPredicted RBP2.45□□□□□ -2.02
COPS3-217ENST00000583160 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.44□□□□□ -2.02
COPS3-217ENST00000583160 CACNB4O00305 520 aaPredicted RBP2.44□□□□□ -2.02
COPS3-217ENST00000583160 PSMA7O14818 248 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 CFLARO15519 480 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 GSTA1P08263 222 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 SERPINF2P08697 491 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 CYP11B1P15538 503 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 CCNE1P24864 410 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 RBMXP38159 391 aaKnown RBP2.44□□□□□ -2.02
COPS3-217ENST00000583160 EPS15P42566 896 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 CAV2P51636 162 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 SMSP52788 366 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 YWHAHQ04917 246 aaPredicted RBP2.44□□□□□ -2.02
COPS3-217ENST00000583160 EBI3Q14213 229 aa2.44□□□□□ -2.02
COPS3-217ENST00000583160 TYSND1Q2T9J0 566 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms