RNA–Protein interactions for RNA: ENST00000583085.1

STRADA-222, Transcript of STE20-related kinase adaptor alpha, human

Gene STRADA, Length 3,685 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-222	ENST00000583085	TDG	Q13569	410 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	ZNF846	Q147U1	533 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	LARS2	Q15031	903 aa	Known RBP	11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	LIPK	Q5VXJ0	399 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	SLC27A4	Q6P1M0	643 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	TMEM203	Q969S6	136 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	OTULIN	Q96BN8	352 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	CRELD1	Q96HD1	420 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	CDADC1	Q9BWV3	514 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	PHF7	Q9BWX1	381 aa	Predicted RBP	11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	ANKH	Q9HCJ1	492 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	HMG20A	Q9NP66	347 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	RPL36	Q9Y3U8	105 aa	Known RBP	11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	TMEM184B	Q9Y519	407 aa	Predicted RBP	11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	FAM183A	A6NL82	134 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	STX11	O75558	287 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	CSTF2	P33240	577 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	TSPAN31	Q12999	210 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	KCNAB1	Q14722	419 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	SPHAR	Q15513	63 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	HSDL2	Q6YN16	418 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	SAMD14	Q8IZD0	417 aa	Predicted RBP	11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	ZNF687	Q8N1G0	1237 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	ARHGEF39	Q8N4T4	335 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	FAM26E	Q8N5C1	309 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	PIGX	Q8TBF5	258 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	GNPDA2	Q8TDQ7	276 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	GRHL3	Q8TE85	626 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	ACOT11	Q8WXI4	607 aa	Predicted RBP	11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	TGM7	Q96PF1	710 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	CNPPD1	Q9BV87	410 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	DPH1	Q9BZG8	443 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	UBE2Z	Q9H832	354 aa	Predicted RBP	11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	YARS2	Q9Y2Z4	477 aa	Known RBP	11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	CSNK1G3	Q9Y6M4	447 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	NOTO	A8MTQ0	251 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	AGRP	O00253	132 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	CCRL2	O00421	344 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	PLOD3	O60568	738 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	SULT1C4	O75897	302 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	PIP	P12273	146 aa	Predicted RBP	11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	MYF5	P13349	255 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	GLUL	P15104	373 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	MAOA	P21397	527 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	LIMK1	P53667	647 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	ZNF404	Q494X3	552 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	ZNF619	Q8N2I2	560 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	PRSS27	Q9BQR3	290 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	TAPBPL	Q9BX59	468 aa		11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	POLR2J2	Q9GZM3	115 aa	Known RBP	11.28	□□□□□ -0.6
STRADA-222	ENST00000583085	FAM221B	A6H8Z2	402 aa		11.27	□□□□□ -0.6
STRADA-222	ENST00000583085	METTL15	A6NJ78	407 aa		11.27	□□□□□ -0.6
STRADA-222	ENST00000583085	FOXS1	O43638	330 aa		11.27	□□□□□ -0.6
STRADA-222	ENST00000583085	DNASE1L3	Q13609	305 aa		11.27	□□□□□ -0.6
STRADA-222	ENST00000583085	OCLN	Q16625	522 aa		11.27	□□□□□ -0.6
STRADA-222	ENST00000583085	VWA5B2	Q8N398	1253 aa		11.27	□□□□□ -0.6
STRADA-222	ENST00000583085	FBXO8	Q9NRD0	319 aa		11.27	□□□□□ -0.6
STRADA-222	ENST00000583085	UCKL1	Q9NWZ5	548 aa		11.27	□□□□□ -0.6
STRADA-222	ENST00000583085	CEP192	Q8TEP8	1941 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	IGKV1D-16	P01601	117 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	OCM2	P0CE71	109 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	OCM	P0CE72	109 aa	Predicted RBP	11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	NDUFA9	Q16795	377 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	WDR45B	Q5MNZ6	344 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	SMARCD3	Q6STE5	483 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	USP43	Q70EL4	1123 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	AMER2	Q8N7J2	671 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	ZFP41	Q8N8Y5	198 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	CDRT4	Q8N9R6	151 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	POGLUT1	Q8NBL1	392 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	C9orf43	Q8TAL5	461 aa	Predicted RBP	11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	RNFT2	Q96EX2	444 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	SAMD8	Q96LT4	415 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	PTCHD1	Q96NR3	888 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	KCNS3	Q9BQ31	491 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	MAU2	Q9Y6X3	613 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	IGHV5-51	A0A0C4DH38	117 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	ZC3H12D	A2A288	527 aa	Known RBP	11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	SMIM30	A4D0T7	59 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	GSTM3	P21266	225 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	CD38	P28907	300 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	BLK	P51451	505 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	GAS1	P54826	345 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	RAB38	P57729	211 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	PSG6	Q00889	435 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	CSTF1	Q05048	431 aa	Known RBP	11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	SMAD4	Q13485	552 aa	Known RBP	11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	FAM53B	Q14153	422 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	OR1Q1	Q15612	314 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	SLC35F1	Q5T1Q4	408 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	PDZK1	Q5T2W1	519 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	NANOGP1	Q8N7R0	232 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	OR4F15	Q8NGB8	312 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	TMEM163	Q8TC26	289 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	GATAD2B	Q8WXI9	593 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	CNOT9	Q92600	299 aa	Known RBP	11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	CTHRC1	Q96CG8	243 aa		11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	TES	Q9UGI8	421 aa	Known RBP	11.27	□□□□□ -0.61
STRADA-222	ENST00000583085	MPDZ	O75970	2070 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms