RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	C4orf33	Q8N1A6	199 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	OR2T11	Q8NH01	316 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	UBLCP1	Q8WVY7	318 aa	Predicted RBP	10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	JADE3	Q92613	823 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PIGT	Q969N2	578 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PPCDC	Q96CD2	204 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CHMP6	Q96FZ7	201 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	C16orf58	Q96GQ5	468 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	MARK4	Q96L34	752 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	RNF145	Q96MT1	663 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	C12orf49	Q9H741	205 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	C1orf109	Q9NX04	203 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	EMC9	Q9Y3B6	208 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	HEATR5A	Q86XA9	2040 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	IGLV3-32	A0A0A0MS00	114 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114		A0A1W2PRB8	838 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	SLC28A1	O00337	649 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	RGS14	O43566	566 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	KCNK2	O95069	426 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	NKX2-2	O95096	273 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PLAU	P00749	431 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	HEXA	P06865	529 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	THBD	P07204	575 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	FCGR2A	P12318	317 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	IL11	P20809	199 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	FPR1	P21462	350 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	LOX	P28300	417 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PCSK6	P29122	969 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	DNAJB13	P59910	316 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	SLC18A2	Q05940	514 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	DUSP5	Q16690	384 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	TMEM44	Q2T9K0	475 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CTU2	Q2VPK5	515 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CCDC153	Q494R4	210 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	GALNTL6	Q49A17	601 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	GLYR1	Q49A26	553 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	VPS26B	Q4G0F5	336 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	LIPM	Q5VYY2	423 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	C10orf107	Q8IVU9	208 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CDRT4	Q8N9R6	151 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	SLC16A11	Q8NCK7	471 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	LRRN4CL	Q8ND94	238 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ZFP28	Q8NHY6	868 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PPP1R14C	Q8TAE6	165 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	EPS8L3	Q8TE67	593 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	GIMAP5	Q96F15	307 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ZBED6CL	Q96FA7	236 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	COX4I2	Q96KJ9	171 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PIP5K1A	Q99755	562 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	TUBB1	Q9H4B7	451 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	REEP4	Q9H6H4	257 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	MED17	Q9NVC6	651 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	OXSM	Q9NWU1	459 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	GIMAP2	Q9UG22	337 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	MCTS1	Q9ULC4	181 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	WBP11	Q9Y2W2	641 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ARID1A	O14497	2285 aa		10.42	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	DSCAM	O60469	2012 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	NPIPA5	A0A0B4J1W7	369 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114		A0A0J9YW62	118 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	TMEM233	B4DJY2	109 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ALG1L2	C9J202	215 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	NPIPA7	E9PJI5	369 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	COPE	O14579	308 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	AZIN1	O14977	448 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	SYNGR4	O95473	234 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	NTN1	O95631	604 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	NPIPA8	P0DM63	369 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	HPGD	P15428	266 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ZNF17	P17021	662 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	KRT4	P19013	534 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	SFTPD	P35247	375 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	MAP3K8	P41279	467 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CCT5	P48643	541 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ZNF41	P51814	821 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	FGFBP1	Q14512	234 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CD226	Q15762	336 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PLPPR5	Q32ZL2	321 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	RFTN2	Q52LD8	501 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	HBM	Q6B0K9	141 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	MFSD12	Q6NUT3	480 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	STAC2	Q6ZMT1	411 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114		Q6ZSR9	355 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	WFDC8	Q8IUA0	241 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	WDR75	Q8IWA0	830 aa	Known RBP	10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	DDIAS	Q8IXT1	998 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	LRRC75A-AS1	Q8N1F1	130 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	COX18	Q8N8Q8	333 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	OR6K3	Q8NGY3	331 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CEP70	Q8NHQ1	597 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	KIF18A	Q8NI77	898 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ROBO4	Q8WZ75	1007 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ARSG	Q96EG1	525 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	GMPPA	Q96IJ6	420 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ADGRG7	Q96K78	797 aa		10.41	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	MS4A4E	Q96PG1	132 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms