RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 OR5F1O95221 314 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 MED26O95402 600 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 CBX7O95931 251 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 CCDC159P0C7I6 412 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 SMIM18P0DKX4 95 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 OSMP13725 252 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 NID1P14543 1247 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 TRHRP34981 398 aaPredicted RBP8.61□□□□□ -1.03
SS18-220ENST00000582092 GGT2P36268 569 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 POLR2IP36954 125 aaKnown RBP8.61□□□□□ -1.03
SS18-220ENST00000582092 GSSP48637 474 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 CLK3P49761 638 aaKnown RBP8.61□□□□□ -1.03
SS18-220ENST00000582092 HLCSP50747 726 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 CDH15P55291 814 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 ISL1P61371 349 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 DCAF7P61962 342 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 DCDP81605 110 aaKnown RBP8.61□□□□□ -1.03
SS18-220ENST00000582092 CFHR1Q03591 330 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 FUT5Q11128 374 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 CDK5R2Q13319 367 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 ELAVL1Q15717 326 aaKnown RBP8.61□□□□□ -1.03
SS18-220ENST00000582092 TBC1D25Q3MII6 688 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 ENTPD8Q5MY95 495 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 PODNL1Q6PEZ8 512 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 ZNF773Q6PK81 442 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 ZNF836Q6ZNA1 936 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 PTCHD4Q6ZW05 846 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 SLC29A4Q7RTT9 530 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 ZNF550Q7Z398 422 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 TSEN54Q7Z6J9 526 aaKnown RBP8.61□□□□□ -1.03
SS18-220ENST00000582092 PPP1R3BQ86XI6 285 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 RBM45Q8IUH3 476 aaKnown RBP8.61□□□□□ -1.03
SS18-220ENST00000582092 LACC1Q8IV20 430 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 SVOPQ8N4V2 548 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 ZNF540Q8NDQ6 660 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 ZNF248Q8NDW4 579 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 OR9Q2Q8NGE9 314 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 OR14A16Q8NHC5 309 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 SNIP1Q8TAD8 396 aaKnown RBP8.61□□□□□ -1.03
SS18-220ENST00000582092 IPCEF1Q8WWN9 437 aaPredicted RBP8.61□□□□□ -1.03
SS18-220ENST00000582092 MYDGFQ969H8 173 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 ZNF501Q96CX3 271 aaPredicted RBP8.61□□□□□ -1.03
SS18-220ENST00000582092 LIN37Q96GY3 246 aaPredicted RBP8.61□□□□□ -1.03
SS18-220ENST00000582092 SLC41A3Q96GZ6 507 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 HRASLS5Q96KN8 279 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 CCDC74BQ96LY2 380 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 SLC46A1Q96NT5 459 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 NODALQ96S42 347 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 TSC22D3Q99576 134 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 CMKLR1Q99788 373 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 OR8D2Q9GZM6 311 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 SAP130Q9H0E3 1048 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 ANKRD19PQ9H560 264 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 NDRG4Q9ULP0 352 aaKnown RBP8.61□□□□□ -1.03
SS18-220ENST00000582092 CBLCQ9ULV8 474 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 RAXQ9Y2V3 346 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 CCDC88CQ9P219 2028 aa8.61□□□□□ -1.03
SS18-220ENST00000582092 DSPPQ9NZW4 1301 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 TRAPPC13A5PLN9 417 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 PRAMEF25A6NGN4 478 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 SNTNA6NMZ2 147 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 GTPBP1O00178 669 aaKnown RBP8.6□□□□□ -1.03
SS18-220ENST00000582092 TAF4O00268 1085 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 FFAR1O14842 300 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 PLD2O14939 933 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 KIAA0513O60268 411 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 ABCB7O75027 752 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 KLK3P07288 261 aaPredicted RBP8.6□□□□□ -1.03
SS18-220ENST00000582092 GUSBP08236 651 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 JMJD7P0C870 316 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 CBLP22681 906 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 CRHBPP24387 322 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 IL12BP29460 328 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 FMO3P31513 532 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 CCKBRP32239 447 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 EMDP50402 254 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 UCNP55089 124 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 CXCR4P61073 352 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 COPZ1P61923 177 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 FUT7Q11130 342 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 TRA2AQ13595 282 aaKnown RBP eCLIP8.6□□□□□ -1.03
SS18-220ENST00000582092 APOFQ13790 326 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 MAD2L1BPQ15013 274 aaPredicted RBP8.6□□□□□ -1.03
SS18-220ENST00000582092 NEDD8Q15843 81 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 NADK2Q4G0N4 442 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 MRPL2Q5T653 305 aaKnown RBP8.6□□□□□ -1.03
SS18-220ENST00000582092 TMEM164Q5U3C3 297 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 RHBDD2Q6NTF9 364 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 IGF2-ASQ6U949 168 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 DGAT2L6Q6ZPD8 337 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 KCTD8Q6ZWB6 473 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 RAB11FIP2Q7L804 512 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 ARHGAP22Q7Z5H3 698 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 ZNF440Q8IYI8 595 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 PARP8Q8N3A8 854 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 CLIP4Q8N3C7 705 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 AGBL5Q8NDL9 886 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 RCBTB1Q8NDN9 531 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 SIMC1Q8NDZ2 872 aa8.6□□□□□ -1.03
SS18-220ENST00000582092 OR4K5Q8NGD3 323 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms