RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 HK1P19367 917 aa18.9■□□□□ 0.62
CCDC42-203ENST00000581598 EEFSECP57772 596 aaKnown RBP18.9■□□□□ 0.62
CCDC42-203ENST00000581598 PRR5P85299 388 aa18.9■□□□□ 0.62
CCDC42-203ENST00000581598 HSPB3Q12988 150 aa18.9■□□□□ 0.62
CCDC42-203ENST00000581598 PDCD2Q16342 344 aaPredicted RBP18.9■□□□□ 0.62
CCDC42-203ENST00000581598 VPS26BQ4G0F5 336 aa18.9■□□□□ 0.62
CCDC42-203ENST00000581598 CEP70Q8NHQ1 597 aa18.9■□□□□ 0.62
CCDC42-203ENST00000581598 RFWD2Q8NHY2 731 aa18.9■□□□□ 0.62
CCDC42-203ENST00000581598 PPCDCQ96CD2 204 aa18.9■□□□□ 0.62
CCDC42-203ENST00000581598 MTERF3Q96E29 417 aa18.9■□□□□ 0.62
CCDC42-203ENST00000581598 ZBED6CLQ96FA7 236 aaPredicted RBP18.9■□□□□ 0.62
CCDC42-203ENST00000581598 DACH2Q96NX9 599 aa18.9■□□□□ 0.62
CCDC42-203ENST00000581598 RTN4RQ9BZR6 473 aa18.9■□□□□ 0.62
CCDC42-203ENST00000581598 HHATLQ9HCP6 504 aa18.9■□□□□ 0.62
CCDC42-203ENST00000581598 NPHS2Q9NP85 383 aa18.9■□□□□ 0.62
CCDC42-203ENST00000581598 ACSS1Q9NUB1 689 aaPredicted RBP18.9■□□□□ 0.62
CCDC42-203ENST00000581598 KLHL14Q9P2G3 628 aa18.9■□□□□ 0.62
CCDC42-203ENST00000581598 TRPC5OSA6NMA1 111 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 SDHDO14521 159 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 SKAP2O75563 359 aaPredicted RBP18.89■□□□□ 0.61
CCDC42-203ENST00000581598 KCNH1O95259 989 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 FAM107AO95990 144 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 GABRA3P34903 492 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 ASMTP46597 345 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 DIO3P55073 304 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 RFTN2Q52LD8 501 aaPredicted RBP18.89■□□□□ 0.61
CCDC42-203ENST00000581598 ZNF385BQ569K4 471 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 OR2A2Q6IF42 318 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 EPGNQ6UW88 154 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 CHMP1BQ7LBR1 199 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 CPLX4Q7Z7G2 160 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 MEIOBQ8N635 442 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 CDRT4Q8N9R6 151 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 DUSP19Q8WTR2 217 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 GFM2Q969S9 779 aaKnown RBP18.89■□□□□ 0.61
CCDC42-203ENST00000581598 MAELQ96JY0 434 aaKnown RBP18.89■□□□□ 0.61
CCDC42-203ENST00000581598 CCT8L2Q96SF2 557 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 NUF2Q9BZD4 464 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 LIME1Q9H400 295 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 CCM2LQ9NUG4 571 aaPredicted RBP18.89■□□□□ 0.61
CCDC42-203ENST00000581598 GALNT8Q9NY28 637 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 MED11Q9P086 117 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 PACSIN3Q9UKS6 424 aa18.89■□□□□ 0.61
CCDC42-203ENST00000581598 ITPR3Q14573 2671 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 A0A1W2PNV4 684 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 A8MXE2 369 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 SNX3O60493 162 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 TNFRSF21O75509 655 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 UTS2O95399 124 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 TGM6O95932 706 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 NGFRP08138 427 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 LINC00032P0C843 101 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 GPC1P35052 558 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 RPL38P63173 70 aaKnown RBP18.88■□□□□ 0.61
CCDC42-203ENST00000581598 C17orf67Q0P5P2 114 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 RAET1LQ5VY80 246 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 ZCCHC12Q6PEW1 402 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 PLXDC2Q6UX71 529 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 MARCH3Q86UD3 253 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 GCNT2Q8N0V5 402 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 LINC01560Q8TB33 94 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 CIDECQ96AQ7 238 aaPredicted RBP18.88■□□□□ 0.61
CCDC42-203ENST00000581598 MBD6Q96DN6 1003 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 C1GALT1C1Q96EU7 318 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 GIMAP5Q96F15 307 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 C3orf30Q96M34 536 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 TSSK3Q96PN8 268 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 PIGQQ9BRB3 760 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 FAM107BQ9H098 131 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 ZNF337Q9Y3M9 751 aa18.88■□□□□ 0.61
CCDC42-203ENST00000581598 GXYLT2A0PJZ3 443 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 OR2M5A3KFT3 312 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 SLC22A20A6NK97 555 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 MSTNO14793 375 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 IGKV1D-16P01601 117 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 DDX5P17844 614 aaKnown RBP18.87■□□□□ 0.61
CCDC42-203ENST00000581598 TCEA1P23193 301 aaKnown RBP18.87■□□□□ 0.61
CCDC42-203ENST00000581598 DNASE1P24855 282 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 LCN1P31025 176 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 CPA2P48052 419 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 IDH3AP50213 366 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 AQP5P55064 265 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 MANFP55145 182 aaKnown RBP18.87■□□□□ 0.61
CCDC42-203ENST00000581598 CLDN15P56746 228 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 STX5Q13190 355 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 MLC1Q15049 377 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 TMEM44Q2T9K0 475 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 ANKRD26P1Q6NSI1 321 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 PAMR1Q6UXH9 720 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 P4HA3Q7Z4N8 544 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 SPATA21Q7Z572 469 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 R3HCC1LQ7Z5L2 792 aaKnown RBP18.87■□□□□ 0.61
CCDC42-203ENST00000581598 CAMKMTQ7Z624 323 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 PIGWQ7Z7B1 504 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 LUZP2Q86TE4 346 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 DDIASQ8IXT1 998 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 CHDHQ8NE62 594 aaPredicted RBP18.87■□□□□ 0.61
CCDC42-203ENST00000581598 NUP43Q8NFH3 380 aa18.87■□□□□ 0.61
CCDC42-203ENST00000581598 FAM110BQ8TC76 370 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms