RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 BOKQ9UMX3 212 aaPredicted RBP9.04□□□□□ -0.96
GGA3-209ENST00000580646 CREBBPQ92793 2442 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 HEATR5AQ86XA9 2040 aa9.04□□□□□ -0.96
GGA3-209ENST00000580646 ZNF407Q9C0G0 2248 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 PRAMEF25A6NGN4 478 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 EVPLLA8MZ36 301 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 ALG1L2C9J202 215 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 NPIPB9F8W1W9 429 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 ACOT7O00154 380 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 TFECO14948 347 aaPredicted RBP9.03□□□□□ -0.96
GGA3-209ENST00000580646 ZNHIT1O43257 154 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 TRIM3O75382 744 aaPredicted RBP9.03□□□□□ -0.96
GGA3-209ENST00000580646 STX11O75558 287 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 IGKV1D-16P01601 117 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 OR12D1P0DN82 309 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 ESRRAP11474 423 aaPredicted RBP9.03□□□□□ -0.96
GGA3-209ENST00000580646 ABOP16442 354 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 ENDOUP21128 410 aaKnown RBP9.03□□□□□ -0.96
GGA3-209ENST00000580646 ATP6V1C1P21283 382 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 EVI2BP34910 448 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 DCTP40126 519 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 RFC3P40938 356 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 CLK3P49761 638 aaKnown RBP9.03□□□□□ -0.96
GGA3-209ENST00000580646 GAS1P54826 345 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 GPR85P60893 370 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 DSTNP60981 165 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 RPS26P62854 115 aaKnown RBP9.03□□□□□ -0.96
GGA3-209ENST00000580646 HSF1Q00613 529 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 ROR2Q01974 943 aaKnown RBP9.03□□□□□ -0.96
GGA3-209ENST00000580646 FOXO1Q12778 655 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 GNA13Q14344 377 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 MMEL1Q495T6 779 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 GTDC1Q4AE62 458 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 PRAMEF8Q5VWM4 474 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 PRAMEF7Q5VXH5 474 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 REP15Q6BDI9 236 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 ANGPTL8Q6UXH0 198 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 HACD2Q6Y1H2 254 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 LRRC74BQ6ZQY2 392 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 C16orf62Q7Z3J2 963 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 SNX32Q86XE0 403 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 MISPQ8IVT2 679 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 CHERPQ8IWX8 916 aaKnown RBP9.03□□□□□ -0.96
GGA3-209ENST00000580646 CCDC197Q8NCU1 140 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 OR8J3Q8NGG0 315 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 FBXO30Q8TB52 745 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 ITLN2Q8WWU7 325 aaPredicted RBP9.03□□□□□ -0.96
GGA3-209ENST00000580646 LRRC58Q96CX6 371 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 ZNF597Q96LX8 424 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 TRNT1Q96Q11 434 aaKnown RBP9.03□□□□□ -0.96
GGA3-209ENST00000580646 CGREF1Q99674 301 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 SH3GL1Q99961 368 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 CPPED1Q9BRF8 314 aaPredicted RBP9.03□□□□□ -0.96
GGA3-209ENST00000580646 DOHHQ9BU89 302 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 SPATA9Q9BWV2 254 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 ZNF350Q9GZX5 532 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 METTL7AQ9H8H3 244 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 IL1RL2Q9HB29 575 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 ZFP64Q9NPA5 681 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 UBQLN4Q9NRR5 601 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 GID8Q9NWU2 228 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 KLRF1Q9NZS2 232 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 CALML5Q9NZT1 146 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 ARMCX1Q9P291 453 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 P2RX2Q9UBL9 471 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 TINAGQ9UJW2 476 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 WIF1Q9Y5W5 379 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 KCNE3Q9Y6H6 103 aa9.03□□□□□ -0.96
GGA3-209ENST00000580646 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.03□□□□□ -0.96
GGA3-209ENST00000580646 MYO7BQ6PIF6 2116 aa9.02□□□□□ -0.96
GGA3-209ENST00000580646 IGLV3-32A0A0A0MS00 114 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 C15orf38-AP3S2A0A0A6YYH1 394 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 TMEM247A6NEH6 219 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 FXYD1O00168 92 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 NDUFAB1O14561 156 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 ADAM10O14672 748 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 MRASO14807 208 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 SNPHO15079 494 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 KIAA0513O60268 411 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 ICOSLGO75144 302 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 TNFRSF21O75509 655 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 UTS2O95399 124 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 OXSR1O95747 527 aaPredicted RBP9.02□□□□□ -0.97
GGA3-209ENST00000580646 COX4I1P13073 169 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 ADH7P40394 386 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 CRATP43155 626 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 DNASE1L1P49184 302 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 ATP12AP54707 1039 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 SH3BGRP55822 239 aaPredicted RBP9.02□□□□□ -0.97
GGA3-209ENST00000580646 KCNJ2P63252 427 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 HPCAP84074 193 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 FUT5Q11128 374 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 DYNC1I2Q13409 638 aaKnown RBP9.02□□□□□ -0.97
GGA3-209ENST00000580646 ART3Q13508 389 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 NFYCQ13952 458 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 GRAMD1BQ3KR37 738 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 COX20Q5RI15 118 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.02□□□□□ -0.97
GGA3-209ENST00000580646 PRAMEF20Q5VT98 475 aa9.02□□□□□ -0.97
GGA3-209ENST00000580646 SP5Q6BEB4 398 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms