RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 LINC00303Q3SY05 128 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 EIPR1Q53HC9 387 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 ZNF766Q5HY98 468 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 ZNF311Q5JNZ3 666 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 ZNF468Q5VIY5 522 aaPredicted RBP13.1□□□□□ -0.31
SKA2-205ENST00000580541 ASRGL1Q7L266 308 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 GALNT10Q86SR1 603 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 EID3Q8N140 333 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 C10orf111Q8N326 155 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 RNF148Q8N7C7 305 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 ZNF614Q8N883 585 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 MDS2Q8NDY4 140 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 WDR60Q8WVS4 1066 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 FAM162AQ96A26 154 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 LRGUKQ96M69 825 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 FAM173AQ9BQD7 235 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 DOHHQ9BU89 302 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 OSBPL11Q9BXB4 747 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 CADM1Q9BY67 442 aaKnown RBP13.1□□□□□ -0.31
SKA2-205ENST00000580541 ANGPTL4Q9BY76 406 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 GORASP2Q9H8Y8 452 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 SH2D2AQ9NP31 389 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 FBXO34Q9NWN3 711 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 RPS6KA6Q9UK32 745 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 BAG5Q9UL15 447 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 BOKQ9UMX3 212 aaPredicted RBP13.1□□□□□ -0.31
SKA2-205ENST00000580541 SNX13Q9Y5W8 968 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 GPC6Q9Y625 555 aaPredicted RBP13.1□□□□□ -0.31
SKA2-205ENST00000580541 DSPPQ9NZW4 1301 aa13.1□□□□□ -0.31
SKA2-205ENST00000580541 NINQ8N4C6 2090 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 SERINC4A6NH21 518 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 NPIPB9F8W1W9 429 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 CIB2O75838 187 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 F10P00742 488 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 C8BP07358 591 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 FAM87AP0C7U9 286 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 PABPC4LP0CB38 370 aaKnown RBP13.09□□□□□ -0.31
SKA2-205ENST00000580541 NID1P14543 1247 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 GGT1P19440 569 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 ELAVL4P26378 380 aaKnown RBP13.09□□□□□ -0.31
SKA2-205ENST00000580541 AQP1P29972 269 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 PRKAR1BP31321 381 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 MASP1P48740 699 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 PCBP3P57721 371 aaKnown RBP13.09□□□□□ -0.31
SKA2-205ENST00000580541 ZNF169Q14929 603 aaPredicted RBP13.09□□□□□ -0.31
SKA2-205ENST00000580541 MTX3Q5HYI7 312 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 PDZK1Q5T2W1 519 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 DHFR2Q86XF0 187 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 ZNF440Q8IYI8 595 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 C10orf67Q8IYJ2 551 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 POGLUT1Q8NBL1 392 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 OR52E4Q8NGH9 312 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 PHOSPHO1Q8TCT1 267 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 GRHL3Q8TE85 626 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 SLC35B4Q969S0 331 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 ASB9Q96DX5 294 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 NSMCE2Q96MF7 247 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 SIGLEC12Q96PQ1 595 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 NODALQ96S42 347 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 PINK1Q9BXM7 581 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 RUBCNLQ9H714 662 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 PTGES2Q9H7Z7 377 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 ACTR3BQ9P1U1 418 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 EGFL7Q9UHF1 273 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 CNOT11Q9UKZ1 510 aaKnown RBP13.09□□□□□ -0.31
SKA2-205ENST00000580541 SAMD4AQ9UPU9 718 aaKnown RBP13.09□□□□□ -0.31
SKA2-205ENST00000580541 B3GNT3Q9Y2A9 372 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 TP53TG5Q9Y2B4 290 aa13.09□□□□□ -0.31
SKA2-205ENST00000580541 SUV39H1O43463 412 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 PEX1O43933 1283 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 NME2P1O60361 137 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 EIF4E2O60573 245 aaKnown RBP13.08□□□□□ -0.32
SKA2-205ENST00000580541 MFN2O95140 757 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 ANGPTL1O95841 491 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 CSTAP01040 98 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 CCL3P10147 92 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 UQCRBP14927 111 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 HOXB6P17509 224 aaKnown RBP13.08□□□□□ -0.32
SKA2-205ENST00000580541 RPS4Y1P22090 263 aaKnown RBP13.08□□□□□ -0.32
SKA2-205ENST00000580541 NME2P22392 152 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 MAPK11Q15759 364 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 FXNQ16595 210 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 RPS26P11Q5JNZ5 115 aaPredicted RBP13.08□□□□□ -0.32
SKA2-205ENST00000580541 RNF220Q5VTB9 566 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 PGM2L1Q6PCE3 622 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 Q6ZS92 163 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 MDGA2Q7Z553 956 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 ZAR1Q86SH2 424 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 ULK2Q8IYT8 1036 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 TEX19Q8NA77 164 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 CATSPER1Q8NEC5 780 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 OR1J4Q8NGS1 313 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 PROX1Q92786 737 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 SCMH1Q96GD3 660 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 TMEM41AQ96HV5 264 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 SLC25A18Q9H1K4 315 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 PPP4R1LQ9P1A2 415 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 B4GALT7Q9UBV7 327 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 WIF1Q9Y5W5 379 aa13.08□□□□□ -0.32
SKA2-205ENST00000580541 MAP1BP46821 2468 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms