RNA–Protein interactions for RNA: ENST00000579451.1

PSMD11-208, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 2

Gene PSMD11, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-208	ENST00000579451	PCSK6	P29122	969 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	CTBP2	P56545	445 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	HSPB3	Q12988	150 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	SLC29A2	Q14542	456 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	KIAA0040	Q15053	153 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	VPS26B	Q4G0F5	336 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	ZYG11A	Q6WRX3	759 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	FRMD7	Q6ZUT3	714 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	SH2D5	Q6ZV89	423 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	WDR75	Q8IWA0	830 aa	Known RBP	13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	CNPY4	Q8N129	248 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	OR10D3	Q8NH80	312 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	MZB1	Q8WU39	189 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	TMEM171	Q8WVE6	324 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	SLC9A6	Q92581	669 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	FANCF	Q9NPI8	374 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	EQTN	Q9NQ60	294 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	GLRX2	Q9NS18	164 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	MCTS1	Q9ULC4	181 aa	Known RBP	13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	CLEC4A	Q9UMR7	237 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	CCL27	Q9Y4X3	112 aa		13.58	□□□□□ -0.24
PSMD11-208	ENST00000579451	C7orf72	A4D263	438 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	ADAMDEC1	O15204	470 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	PDPK1	O15530	556 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	NDUFB5	O43674	189 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	TMCC2	O75069	709 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	CRCP	O75575	148 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	OXSR1	O95747	527 aa	Predicted RBP	13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	PRPH2	P23942	346 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	GPC1	P35052	558 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	NR1H2	P55055	460 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	RAC1	P63000	192 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	CTU2	Q2VPK5	515 aa	Known RBP	13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	BEND4	Q6ZU67	534 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	ESPNL	Q6ZVH7	1005 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	EXOC3L1	Q86VI1	746 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	CDRT4	Q8N9R6	151 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	OR4C3	Q8NH37	302 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	CEP70	Q8NHQ1	597 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	ZBTB8A	Q96BR9	441 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	ZNF764	Q96H86	408 aa	Predicted RBP	13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	NPAS1	Q99742	590 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	OR10A4	Q9H209	315 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	TNFRSF12A	Q9NP84	129 aa		13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	ZNF701	Q9NV72	531 aa	Predicted RBP	13.57	□□□□□ -0.24
PSMD11-208	ENST00000579451	FBN1	P35555	2871 aa	Known RBP	13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451		A0A1W2PRB8	838 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	INAFM1	C9JVW0	142 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	NPIPB8	E9PQR5	432 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	CXCL13	O43927	109 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	GLRA3	O75311	464 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	SEC22B	O75396	215 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	SYNGR4	O95473	234 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	PLAU	P00749	431 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	UROS	P10746	265 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	PSMA4	P25789	261 aa	Known RBP	13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	PRKAG1	P54619	331 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	PPP2R2B	Q00005	443 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	SLC18A2	Q05940	514 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	PLPPR5	Q32ZL2	321 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	CPTP	Q5TA50	214 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	ANKRD26P1	Q6NSI1	321 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	GALNT10	Q86SR1	603 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	NUP43	Q8NFH3	380 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	ZFP28	Q8NHY6	868 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	FAM110B	Q8TC76	370 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	ACTRT2	Q8TDY3	377 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	GIMAP5	Q96F15	307 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	PLPPR2	Q96GM1	343 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	TMEM204	Q9BSN7	226 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	IQCG	Q9H095	443 aa	Known RBP	13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	CXorf56	Q9H5V9	222 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	MED17	Q9NVC6	651 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	NTM	Q9P121	344 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	TBK1	Q9UHD2	729 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	GPR52	Q9Y2T5	361 aa		13.56	□□□□□ -0.24
PSMD11-208	ENST00000579451	ANK3	Q12955	4377 aa	Known RBP	13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451		A0A0J9YW62	118 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451		A0A1W2PPM1	405 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	TNFSF11	O14788	317 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	HS3ST1	O14792	307 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	TBX19	O60806	448 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	KCNK2	O95069	426 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	OPN1LW	P04000	364 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	PROC	P04070	461 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	ACP2	P11117	423 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	PSMB1	P20618	241 aa	Known RBP	13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	LCN1	P31025	176 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	FRK	P42685	505 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	ZNF41	P51814	821 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	DNAJB13	P59910	316 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	CCDC153	Q494R4	210 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	ZNF385B	Q569K4	471 aa		13.55	□□□□□ -0.24
PSMD11-208	ENST00000579451	CFAP157	Q5JU67	520 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms