RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 DMRTC2Q8IXT2 367 aaPredicted RBP13.44□□□□□ -0.26
SS18-212ENST00000579061 ZNF295-AS1Q8N0V1 137 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 NAXEQ8NCW5 288 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 VPS37AQ8NEZ2 397 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 CDS1Q92903 461 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 C1GALT1C1Q96EU7 318 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 ZFP3Q96NJ6 502 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 TM9SF2Q99805 663 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 TUBA1CQ9BQE3 449 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 HOXD1Q9GZZ0 328 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 PCDHGB4Q9UN71 923 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 RPH3AQ9Y2J0 694 aaPredicted RBP13.44□□□□□ -0.26
SS18-212ENST00000579061 LRBAP50851 2863 aa13.44□□□□□ -0.26
SS18-212ENST00000579061 A0A087WZY1 265 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 DUXAA6NLW8 204 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 KDM4EB2RXH2 506 aaPredicted RBP13.43□□□□□ -0.26
SS18-212ENST00000579061 SCDO00767 359 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 IL18BPO95998 194 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 HPGDP15428 266 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 ATP6V1C1P21283 382 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 CTSSP25774 331 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 PEX19P40855 299 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 STARP49675 285 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 ZNF136P52737 540 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 FBXL19-AS1Q494R0 122 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 RAET1LQ5VY80 246 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 POMZP3Q6PJE2 187 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 MTERF4Q7Z6M4 381 aaKnown RBP13.43□□□□□ -0.26
SS18-212ENST00000579061 ZAR1Q86SH2 424 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 GALNT10Q86SR1 603 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 WDR75Q8IWA0 830 aaKnown RBP13.43□□□□□ -0.26
SS18-212ENST00000579061 CLECL1Q8IZS7 167 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 WNT2BQ93097 391 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 LRRC46Q96FV0 321 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 CHMP6Q96FZ7 201 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 PIGQQ9BRB3 760 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 AIG1Q9NVV5 245 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 FBXO34Q9NWN3 711 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 CLCF1Q9UBD9 225 aa13.43□□□□□ -0.26
SS18-212ENST00000579061 FBN2P35556 2912 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 CLCA1A8K7I4 914 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 E9PBE3 544 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 HCRTR2O43614 444 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 RCBTB2O95199 551 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 AK1P00568 194 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 ALDOCP09972 364 aaKnown RBP13.42□□□□□ -0.26
SS18-212ENST00000579061 S100A3P33764 101 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 OPRM1P35372 400 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 SOAT1P35610 550 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 ASCL1P50553 236 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 EEFSECP57772 596 aaKnown RBP13.42□□□□□ -0.26
SS18-212ENST00000579061 PHC1P78364 1004 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 SRYQ05066 204 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 TMEM44Q2T9K0 475 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 DCST2Q5T1A1 773 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 CCNJQ5T5M9 372 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 C6orf120Q7Z4R8 191 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 MEIOBQ8N635 442 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 ZNF527Q8NB42 609 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 RELL2Q8NC24 303 aaPredicted RBP13.42□□□□□ -0.26
SS18-212ENST00000579061 CHDHQ8NE62 594 aaPredicted RBP13.42□□□□□ -0.26
SS18-212ENST00000579061 OR4A15Q8NGL6 344 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 OR5AK3PQ8NH89 298 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 PIWIL2Q8TC59 973 aaKnown RBP13.42□□□□□ -0.26
SS18-212ENST00000579061 MIPOL1Q8TD10 442 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 ACTRT2Q8TDY3 377 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 ZNF75CPQ92670 426 aaPredicted RBP13.42□□□□□ -0.26
SS18-212ENST00000579061 ARL8AQ96BM9 186 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 OTUB1Q96FW1 271 aaPredicted RBP13.42□□□□□ -0.26
SS18-212ENST00000579061 MAELQ96JY0 434 aaKnown RBP13.42□□□□□ -0.26
SS18-212ENST00000579061 ATP6V1G3Q96LB4 118 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 OR7D2Q96RA2 312 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 ACBD3Q9H3P7 528 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 STOML1Q9UBI4 398 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 BTNL2Q9UIR0 455 aa13.42□□□□□ -0.26
SS18-212ENST00000579061 FOXD3Q9UJU5 478 aaPredicted RBP13.42□□□□□ -0.26
SS18-212ENST00000579061 OR2M5A3KFT3 312 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 C7orf72A4D263 438 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 NPIPB9F8W1W9 429 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 SYT5O00445 386 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 AGR2O95994 175 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 KITP10721 976 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 ZNF17P17021 662 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 POU3F2P20265 443 aaPredicted RBP13.41□□□□□ -0.26
SS18-212ENST00000579061 MATN1P21941 496 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 BMP5P22003 454 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 UQCRC2P22695 453 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 EPHA3P29320 983 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 ATP12AP54707 1039 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 EEF1A1P68104 462 aaKnown RBP13.41□□□□□ -0.26
SS18-212ENST00000579061 LRRC74AQ0VAA2 488 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 SPANXN4Q5MJ08 99 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 EEF1A1P5Q5VTE0 462 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 C9orf106Q8NAJ2 232 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 GLB1L3Q8NCI6 653 aaPredicted RBP13.41□□□□□ -0.26
SS18-212ENST00000579061 SLC35G5Q96KT7 338 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 CCDC115Q96NT0 180 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 SDF2Q99470 211 aa13.41□□□□□ -0.26
SS18-212ENST00000579061 WDR55Q9H6Y2 383 aaPredicted RBP13.41□□□□□ -0.26
SS18-212ENST00000579061 ARGLU1Q9NWB6 273 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms