RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 CLOCKO15516 846 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 TPST1O60507 370 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 TIPRLO75663 272 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 LGI1O95970 557 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 SERPINA7P05543 415 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 NID1P14543 1247 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 CD247P20963 164 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 RPS4Y1P22090 263 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 DCTP40126 519 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 MAGEA2P43356 314 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 SESN3P58005 492 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 Q0VFX4 171 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 ATP6AP1Q15904 470 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 ZNF141Q15928 474 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 NNATQ16517 81 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 DUSP7Q16829 419 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 RNF220Q5VTB9 566 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 BORAQ6PGQ7 559 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 VTCN1Q7Z7D3 282 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 ZNF440Q8IYI8 595 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 ZNF441Q8N8Z8 693 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 SNRNP27Q8WVK2 155 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 APOBEC4Q8WW27 367 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 SLC35B4Q969S0 331 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 TMBIM1Q969X1 311 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 TMCO6Q96DC7 493 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 OMA1Q96E52 524 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 CRELD1Q96HD1 420 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 THOC3Q96J01 351 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 MYOTQ9UBF9 498 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 TEKT2Q9UIF3 430 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 SLC35A3Q9Y2D2 325 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 YARS2Q9Y2Z4 477 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 NPFFR2Q9Y5X5 522 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 KCNMB2Q9Y691 235 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 AP3D1O14617 1153 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 DPM1O60762 260 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 PPM1BO75688 479 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 DNAJB5O75953 348 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 NGFRP08138 427 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 ITGAMP11215 1152 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 RHCEP18577 417 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 ABCD3P28288 659 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 OR2T5Q6IEZ7 315 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 C19orf48Q6RUI8 117 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 OPN5Q6U736 354 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 NUP54Q7Z3B4 507 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 RANBP3LQ86VV4 465 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 CARM1Q86X55 608 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 APLFQ8IW19 511 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 GALNT16Q8N428 558 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 AMER2Q8N7J2 671 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 ZNF614Q8N883 585 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 OR4N2Q8NGD1 307 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 OR2T29Q8NH02 315 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 LRTOMTQ8WZ04 291 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 TTC9Q92623 222 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 POLR2J2Q9GZM3 115 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 LHPPQ9H008 270 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 POLR2J3Q9H1A7 115 aaKnown RBP12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 PRORYQ9H606 182 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 REEP1Q9H902 201 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 AGPAT4Q9NRZ5 378 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 ABI3Q9P2A4 366 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 PRDM4Q9UKN5 801 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 LHX6Q9UPM6 363 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 DTNAQ9Y4J8 743 aa12.82□□□□□ -0.36
CSNK1D-209ENST00000578904 DOCK10Q96BY6 2186 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 LAMA5O15230 3695 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 A6NL46 340 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 CDK2AP1O14519 115 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 TP53I11O14683 189 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 TSPAN2O60636 221 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 E2F6O75461 281 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 UGT2B17O75795 530 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 UTS2O95399 124 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 SEMG1P04279 462 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 UQCRBP14927 111 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 TBXA2RP21731 343 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 GCKP35557 465 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 ADH7P40394 386 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 CCL11P51671 97 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 CRYBA2P53672 197 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 RGS8P57771 180 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 TRIP10Q15642 601 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 TBR1Q16650 682 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 COL28A1Q2UY09 1125 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 ZNF550Q7Z398 422 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 RPS19BP1Q86WX3 136 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 VRK2Q86Y07 508 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 GRAMD2AQ8IUY3 354 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 MISPQ8IVT2 679 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 SVOPLQ8N434 492 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 FAM86B1Q8N7N1 296 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 BRIX1Q8TDN6 353 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 EME1Q96AY2 570 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 EFHD2Q96C19 240 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 ZNF300Q96RE9 604 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 ADOQ96SZ5 270 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 PKP2Q99959 881 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms