RNA–Protein interactions for RNA: ENST00000578718.1

KPNB1-206, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-206ENST00000578718 ANO10Q9NW15 660 aa2.98□□□□□ -1.93
KPNB1-206ENST00000578718 HOOK1Q9UJC3 728 aaKnown RBP2.98□□□□□ -1.93
KPNB1-206ENST00000578718 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.98□□□□□ -1.93
KPNB1-206ENST00000578718 ATG4BQ9Y4P1 393 aa2.98□□□□□ -1.93
KPNB1-206ENST00000578718 CPQQ9Y646 472 aa2.98□□□□□ -1.93
KPNB1-206ENST00000578718 ZFHX4Q86UP3 3567 aa2.98□□□□□ -1.93
KPNB1-206ENST00000578718 LRRC37A2A6NM11 1700 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 SH3PXD2BA1X283 911 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 ARHGAP42A6NI28 874 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 ACOD1A6NK06 481 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 TXNL1O43396 289 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 NEMFO60524 1076 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 BCAS2O75934 225 aaPredicted RBP2.97□□□□□ -1.93
KPNB1-206ENST00000578718 YEATS4O95619 227 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 HOXD4P09016 255 aaPredicted RBP2.97□□□□□ -1.93
KPNB1-206ENST00000578718 PDHBP11177 359 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 AHCYP23526 432 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 SHC1P29353 583 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 PPP2R1BP30154 601 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 PITPNBP48739 271 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 PGFP49763 221 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 NDST1P52848 882 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 SRP54P61011 504 aaKnown RBP2.97□□□□□ -1.93
KPNB1-206ENST00000578718 TPM4P67936 248 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 KLF5Q13887 457 aaPredicted RBP2.97□□□□□ -1.93
KPNB1-206ENST00000578718 SMC1AQ14683 1233 aaKnown RBP2.97□□□□□ -1.93
KPNB1-206ENST00000578718 EMC2Q15006 297 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 KRTAP27-1Q3LI81 207 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 SEL1L3Q68CR1 1132 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 REP15Q6BDI9 236 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 RHBDD2Q6NTF9 364 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 EMBQ6PCB8 327 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 SLC25A42Q86VD7 318 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 SLC22A16Q86VW1 577 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 LRRC49Q8IUZ0 686 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 FBXL16Q8N461 479 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 POM121L12Q8N7R1 296 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 LINC00301Q8NCQ3 95 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 CNNM3Q8NE01 707 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 TMEM185AQ8NFB2 350 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 SLC13A3Q8WWT9 602 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 TOMM40LQ969M1 308 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 C19orf43Q9BQ61 176 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 RAB11FIP5Q9BXF6 653 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 ELL3Q9HB65 397 aaPredicted RBP2.97□□□□□ -1.93
KPNB1-206ENST00000578718 SLC25A19Q9HC21 320 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 COPS7AQ9UBW8 275 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 KCNN3Q9UGI6 736 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 TUBGCP4Q9UGJ1 667 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 ENTPD4Q9Y227 616 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 MRPL11Q9Y3B7 192 aaKnown RBP2.97□□□□□ -1.93
KPNB1-206ENST00000578718 STRAPQ9Y3F4 350 aaKnown RBP2.97□□□□□ -1.93
KPNB1-206ENST00000578718 SIP14410 1827 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 NID2Q14112 1375 aa2.97□□□□□ -1.93
KPNB1-206ENST00000578718 TANC1Q9C0D5 1861 aa2.96□□□□□ -1.93
KPNB1-206ENST00000578718 IGHV3-16A0A0C4DH30 117 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 A0A1B0GTH9 108 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 PP2D1A8MPX8 630 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 RSPH10B2B2RC85 870 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 C5orf67F2Z3F1 127 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 PES1O00541 588 aaKnown RBP2.96□□□□□ -1.94
KPNB1-206ENST00000578718 ZBTB5O15062 677 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 POLR2DO15514 142 aaKnown RBP2.96□□□□□ -1.94
KPNB1-206ENST00000578718 CHMP2AO43633 222 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 CYTH3O43739 400 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 SMC2O95347 1197 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 SYNGR4O95473 234 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 TDP2O95551 362 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 MT-ND1P03886 318 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 FCGR3AP08637 254 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 RSPH10BP0C881 870 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 ACADSP16219 412 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 IL4RP24394 825 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 U2AF2P26368 475 aaKnown RBP eCLIP2.96□□□□□ -1.94
KPNB1-206ENST00000578718 GNA11P29992 359 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 PTGER3P43115 390 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 WASHC5Q12768 1159 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 NME3Q13232 169 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 PNOCQ13519 176 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 CARTPTQ16568 116 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 TPD52L1Q16890 204 aaPredicted RBP2.96□□□□□ -1.94
KPNB1-206ENST00000578718 QRICH1Q2TAL8 776 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 TTC31Q49AM3 519 aaPredicted RBP2.96□□□□□ -1.94
KPNB1-206ENST00000578718 HIGD2BQ4VC39 106 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 HSP90AA4PQ58FG1 418 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 C9orf66Q5T8R8 295 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 ATL3Q6DD88 541 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 FBXL22Q6P050 247 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 LUZP1Q86V48 1076 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 UBALD2Q8IYN6 164 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 LINC00518Q8N0U6 118 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 CSNK1G2-AS1Q8NCQ2 148 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 CHDHQ8NE62 594 aaPredicted RBP2.96□□□□□ -1.94
KPNB1-206ENST00000578718 GMCL1P1Q8NEA9 526 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 TBCKQ8TEA7 893 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 PNPLA2Q96AD5 504 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 RBM18Q96H35 190 aaKnown RBP2.96□□□□□ -1.94
KPNB1-206ENST00000578718 CCDC28BQ9BUN5 200 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 SPZ1Q9BXG8 430 aa2.96□□□□□ -1.94
KPNB1-206ENST00000578718 FTHL17Q9BXU8 183 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms