RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 ZNF628Q5EBL2 1059 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 MFSD4BQ5TF39 518 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 KRT80Q6KB66 452 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 MFSD12Q6NUT3 480 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 CDC73Q6P1J9 531 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 VTCN1Q7Z7D3 282 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 ST13P4Q8IZP2 240 aaPredicted RBP9.39□□□□□ -0.91
SS18-207ENST00000577636 VWA5B2Q8N398 1253 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 ARHGEF39Q8N4T4 335 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 DHRSXQ8N5I4 330 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 COX18Q8N8Q8 333 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 CDRT4Q8N9R6 151 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 ZNF555Q8NEP9 628 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 OR7G2Q8NG99 324 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 OR5D16Q8NGK9 328 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 FAM110BQ8TC76 370 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 RIT1Q92963 219 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 FKBP10Q96AY3 582 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 TAMM41Q96BW9 452 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 NRBF2Q96F24 287 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 CCDC120Q96HB5 630 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 CNBD2Q96M20 576 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 COL21A1Q96P44 957 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 TRNT1Q96Q11 434 aaKnown RBP9.39□□□□□ -0.91
SS18-207ENST00000577636 OR1F2PQ96R84 312 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 OR7D2Q96RA2 312 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 SLC29A1Q99808 456 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 TREX2Q9BQ50 279 aaPredicted RBP9.39□□□□□ -0.91
SS18-207ENST00000577636 SLX1AQ9BQ83 275 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 MESP1Q9BRJ9 268 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 ALOXE3Q9BYJ1 711 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 RBCK1Q9BYM8 510 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.39□□□□□ -0.91
SS18-207ENST00000577636 ARMC7Q9H6L4 198 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 ZNF160Q9HCG1 818 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 ZNF304Q9HCX3 659 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 BCL2L10Q9HD36 194 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 ADAP2Q9NPF8 381 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 BATF3Q9NR55 127 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 GIN1Q9NXP7 522 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 KLHL28Q9NXS3 571 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 ZNF639Q9UID6 485 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 SCOCQ9UIL1 159 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 ZNF232Q9UNY5 417 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 SLC9A8Q9Y2E8 581 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 SH3GLB1Q9Y371 365 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 SAMHD1Q9Y3Z3 626 aaKnown RBP9.39□□□□□ -0.91
SS18-207ENST00000577636 MMACHCQ9Y4U1 282 aa9.39□□□□□ -0.91
SS18-207ENST00000577636 KLF2Q9Y5W3 355 aaPredicted RBP9.39□□□□□ -0.91
SS18-207ENST00000577636 C2CD3Q4AC94 2353 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 TTC36A6NLP5 189 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 DNAJB6O75190 326 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 SEMG1P04279 462 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 FPR1P21462 350 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 GALNSP34059 522 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 PTGER1P34995 402 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 STT3AP46977 705 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 TPD52P55327 224 aaPredicted RBP9.38□□□□□ -0.91
SS18-207ENST00000577636 KCNJ10P78508 379 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 VLDLRP98155 873 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 MAT1AQ00266 395 aaKnown RBP9.38□□□□□ -0.91
SS18-207ENST00000577636 DUSP2Q05923 314 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 MAP4K2Q12851 820 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 ZNF155Q12901 538 aaPredicted RBP9.38□□□□□ -0.91
SS18-207ENST00000577636 MFAP5Q13361 173 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 SYPL1Q16563 259 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 RPS26P11Q5JNZ5 115 aaPredicted RBP9.38□□□□□ -0.91
SS18-207ENST00000577636 C6orf52Q5T4I8 152 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 RPUSD3Q6P087 351 aaKnown RBP9.38□□□□□ -0.91
SS18-207ENST00000577636 SHQ1Q6PI26 577 aaKnown RBP9.38□□□□□ -0.91
SS18-207ENST00000577636 TAGAPQ8N103 731 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 ZNF808Q8N4W9 903 aaPredicted RBP9.38□□□□□ -0.91
SS18-207ENST00000577636 SIRT6Q8N6T7 355 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 SMYD1Q8NB12 490 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 OR11G2Q8NGC1 345 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 CYGBQ8WWM9 190 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 NR4A3Q92570 626 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 PMM1Q92871 262 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 ANKRD9Q96BM1 317 aaPredicted RBP9.38□□□□□ -0.91
SS18-207ENST00000577636 C8orf44Q96CB5 159 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 C16orf58Q96GQ5 468 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 ZNF354BQ96LW1 612 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 TAAR6Q96RI8 345 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 LMF1Q96S06 567 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 EPYCQ99645 322 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 PIP5K1AQ99755 562 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 CRB3Q9BUF7 120 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 ADI1Q9BV57 179 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 PIGUQ9H490 435 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 NTN4Q9HB63 628 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 CTSFQ9UBX1 484 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 C3orf18Q9UK00 162 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 TMCC3Q9ULS5 477 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 IFT52Q9Y366 437 aa9.38□□□□□ -0.91
SS18-207ENST00000577636 GPC6Q9Y625 555 aaPredicted RBP9.38□□□□□ -0.91
SS18-207ENST00000577636 FBN2P35556 2912 aa9.37□□□□□ -0.91
SS18-207ENST00000577636 FER1L5A0AVI2 2057 aa9.37□□□□□ -0.91
SS18-207ENST00000577636 A0A1W2PS29 197 aa9.37□□□□□ -0.91
SS18-207ENST00000577636 H0YAE9 185 aa9.37□□□□□ -0.91
SS18-207ENST00000577636 TNFRSF11BO00300 401 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms