RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 SHISA8B8ZZ34 492 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 NDUFB5O43674 189 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 GMFGO60234 142 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 ULK1O75385 1050 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 GCM2O75603 506 aaPredicted RBP11.89□□□□□ -0.51
COPS3-214ENST00000577246 SLC25A16P16260 332 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 NTSP30990 170 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 NCBP2P52298 156 aaKnown RBP eCLIP11.89□□□□□ -0.51
COPS3-214ENST00000577246 PLTPP55058 493 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 CARD18P57730 90 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 LOXL1Q08397 574 aaPredicted RBP11.89□□□□□ -0.51
COPS3-214ENST00000577246 RASA2Q15283 850 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 KRTAP24-1Q3LI83 254 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 VPS26BQ4G0F5 336 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 CPTPQ5TA50 214 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 TMEM107Q6UX40 140 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 TFAP2EQ6VUC0 442 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 TDRPQ86YL5 185 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 OR2L13Q8N349 312 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 MMGT1Q8N4V1 131 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 BANPQ8N9N5 519 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 KBTBD8Q8NFY9 601 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 ACTRT2Q8TDY3 377 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 RNF128Q8TEB7 428 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 ZNF483Q8TF39 744 aaPredicted RBP11.89□□□□□ -0.51
COPS3-214ENST00000577246 C16orf78Q8WTQ4 265 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 CPNE4Q96A23 557 aaPredicted RBP11.89□□□□□ -0.51
COPS3-214ENST00000577246 MRRFQ96E11 262 aaKnown RBP11.89□□□□□ -0.51
COPS3-214ENST00000577246 RADILQ96JH8 1075 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 HBEGFQ99075 208 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 NAPGQ99747 312 aaPredicted RBP11.89□□□□□ -0.51
COPS3-214ENST00000577246 C19orf24Q9BVV8 132 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 MIEF1Q9NQG6 463 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 GRHL1Q9NZI5 618 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 KLHL13Q9P2N7 655 aa11.89□□□□□ -0.51
COPS3-214ENST00000577246 GDF2Q9UK05 429 aaPredicted RBP11.89□□□□□ -0.51
COPS3-214ENST00000577246 ANK3Q12955 4377 aaKnown RBP11.89□□□□□ -0.51
COPS3-214ENST00000577246 IGHV4-30-2A0A087WSY4 118 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 HMX2A2RU54 273 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 FAM234BA2RU67 622 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 GJE1A6NN92 205 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 MYO1GB0I1T2 1018 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 ALG1L2C9J202 215 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 MANBAO00462 879 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 UBFD1O14562 309 aaKnown RBP11.88□□□□□ -0.51
COPS3-214ENST00000577246 GPRIN2O60269 458 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 PSMG1O95456 288 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 JUNP05412 331 aaKnown RBP11.88□□□□□ -0.51
COPS3-214ENST00000577246 COL6A2P12110 1019 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 DDCP20711 480 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 TIA1P31483 386 aaKnown RBP eCLIP11.88□□□□□ -0.51
COPS3-214ENST00000577246 PHBP35232 272 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 CDH11P55287 796 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 ITGADQ13349 1161 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 ZNF239Q16600 458 aaKnown RBP11.88□□□□□ -0.51
COPS3-214ENST00000577246 CYB5R2Q6BCY4 276 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 MFSD12Q6NUT3 480 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 GALNT18Q6P9A2 607 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 TRABD2AQ86V40 505 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 MISPQ8IVT2 679 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 ZNF619Q8N2I2 560 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 CDYL2Q8N8U2 506 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 OR10H5Q8NGA6 315 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 OSTF1Q92882 214 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 NEUROG1Q92886 237 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 MUCL1Q96DR8 90 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 KLHL15Q96M94 604 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 RNF145Q96MT1 663 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 MRPL57Q9BQC6 102 aaKnown RBP11.88□□□□□ -0.51
COPS3-214ENST00000577246 LMF2Q9BU23 707 aaKnown RBP11.88□□□□□ -0.51
COPS3-214ENST00000577246 C1QTNF3Q9BXJ4 246 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 RAB17Q9H0T7 212 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 MRPL46Q9H2W6 279 aaKnown RBP11.88□□□□□ -0.51
COPS3-214ENST00000577246 DMGDHQ9UI17 866 aaKnown RBP11.88□□□□□ -0.51
COPS3-214ENST00000577246 STK38LQ9Y2H1 464 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 ROS1P08922 2347 aa11.88□□□□□ -0.51
COPS3-214ENST00000577246 A0A1W2PRB8 838 aa11.87□□□□□ -0.51
COPS3-214ENST00000577246 ELOA3DA6NLF2 546 aaPredicted RBP11.87□□□□□ -0.51
COPS3-214ENST00000577246 UPK1AO00322 258 aa11.87□□□□□ -0.51
COPS3-214ENST00000577246 NDUFS7O75251 213 aa11.87□□□□□ -0.51
COPS3-214ENST00000577246 OR4F21O95013 312 aa11.87□□□□□ -0.51
COPS3-214ENST00000577246 ADAP00813 363 aa11.87□□□□□ -0.51
COPS3-214ENST00000577246 CD8AP01732 235 aa11.87□□□□□ -0.51
COPS3-214ENST00000577246 NGFRP08138 427 aa11.87□□□□□ -0.51
COPS3-214ENST00000577246 ANXA4P09525 319 aaPredicted RBP11.87□□□□□ -0.51
COPS3-214ENST00000577246 IFI6P09912 130 aa11.87□□□□□ -0.51
COPS3-214ENST00000577246 CTAGE8P0CG41 777 aa11.87□□□□□ -0.51
COPS3-214ENST00000577246 HPGDP15428 266 aa11.87□□□□□ -0.51
COPS3-214ENST00000577246 SRD5A1P18405 259 aa11.87□□□□□ -0.51
COPS3-214ENST00000577246 ELK4P28324 431 aa11.87□□□□□ -0.51
COPS3-214ENST00000577246 HMOX2P30519 316 aa11.87□□□□□ -0.51
COPS3-214ENST00000577246 GABRA3P34903 492 aa11.87□□□□□ -0.51
COPS3-214ENST00000577246 EIF1P41567 113 aaKnown RBP11.87□□□□□ -0.51
COPS3-214ENST00000577246 CDH13P55290 713 aa11.87□□□□□ -0.51
COPS3-214ENST00000577246 GNG11P61952 73 aa11.87□□□□□ -0.51
COPS3-214ENST00000577246 RAE1P78406 368 aaKnown RBP11.87□□□□□ -0.51
COPS3-214ENST00000577246 MRPS25P82663 173 aaKnown RBP11.87□□□□□ -0.51
COPS3-214ENST00000577246 ZNF763Q0D2J5 394 aa11.87□□□□□ -0.51
COPS3-214ENST00000577246 SLC29A2Q14542 456 aa11.87□□□□□ -0.51
COPS3-214ENST00000577246 PLPPR5Q32ZL2 321 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms