RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 POLE3Q9NRF9 147 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 SLC6A13Q9NSD5 602 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 THUMPD1Q9NXG2 353 aaKnown RBP13.85□□□□□ -0.19
LITAF-217ENST00000575426 SUCOQ9UBS9 1254 aaKnown RBP13.85□□□□□ -0.19
LITAF-217ENST00000575426 FBXL2Q9UKC9 423 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 MKLN1Q9UL63 735 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 MRPS18CQ9Y3D5 142 aaKnown RBP13.85□□□□□ -0.19
LITAF-217ENST00000575426 WDR45Q9Y484 360 aa13.85□□□□□ -0.19
LITAF-217ENST00000575426 TENM4Q6N022 2769 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 NPIPA5A0A0B4J1W7 369 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 EVPLLA8MZ36 301 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 FAM47E-STBD1D6RA91 191 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 NPIPA7E9PJI5 369 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 HMGN4O00479 90 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 ZNHIT1O43257 154 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 NPIPA8P0DM63 369 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 NR2F1P10589 423 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 DPP4P27487 766 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 ADSLP30566 484 aaPredicted RBP13.84□□□□□ -0.19
LITAF-217ENST00000575426 SEC24CP53992 1094 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 DSTNP60981 165 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 GANABQ14697 944 aaKnown RBP13.84□□□□□ -0.19
LITAF-217ENST00000575426 MMEL1Q495T6 779 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 EIPR1Q53HC9 387 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 PAGE3Q5JUK9 113 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 COX20Q5RI15 118 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.84□□□□□ -0.19
LITAF-217ENST00000575426 LRIF1Q5T3J3 769 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 MTFR2Q6P444 385 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 APOOLQ6UXV4 268 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 SPATA21Q7Z572 469 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 CD163Q86VB7 1156 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 OR2M3Q8NG83 312 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 RELTQ969Z4 430 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 RTN4RQ9BZR6 473 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 NMUR2Q9GZQ4 415 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 SLC52A3Q9NQ40 469 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 SAR1AQ9NR31 198 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 TAS2R10Q9NYW0 307 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 CALML5Q9NZT1 146 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 P2RX2Q9UBL9 471 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.84□□□□□ -0.19
LITAF-217ENST00000575426 TINAGQ9UJW2 476 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 CORO2BQ9UQ03 480 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 SLC6A5Q9Y345 797 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 DTNAQ9Y4J8 743 aa13.84□□□□□ -0.19
LITAF-217ENST00000575426 GMFGO60234 142 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 FCMRO60667 390 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 CCDC22O60826 627 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 SEMA7AO75326 666 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 GUSBP08236 651 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 ETFAP13804 333 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 HK1P19367 917 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 KLF10Q13118 480 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 GNA13Q14344 377 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 SYPL1Q16563 259 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 ZNF630Q2M218 657 aaPredicted RBP13.83□□□□□ -0.2
LITAF-217ENST00000575426 GXYLT1Q4G148 440 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 KLHL26Q53HC5 615 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 ZNF585AQ6P3V2 769 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 AAGABQ6PD74 315 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 FGD2Q7Z6J4 655 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 IFNEQ86WN2 208 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 DOLPP1Q86YN1 238 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 CHERPQ8IWX8 916 aaKnown RBP13.83□□□□□ -0.2
LITAF-217ENST00000575426 ZNF619Q8N2I2 560 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 FADS6Q8N9I5 356 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 B4GALNT2Q8NHY0 566 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 ABTB1Q969K4 478 aaPredicted RBP13.83□□□□□ -0.2
LITAF-217ENST00000575426 AURKBQ96GD4 344 aaPredicted RBP13.83□□□□□ -0.2
LITAF-217ENST00000575426 TRNT1Q96Q11 434 aaKnown RBP13.83□□□□□ -0.2
LITAF-217ENST00000575426 OR2B2Q9GZK3 357 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 ZNF350Q9GZX5 532 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 TP63Q9H3D4 680 aaPredicted RBP13.83□□□□□ -0.2
LITAF-217ENST00000575426 ALKBH4Q9NXW9 302 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 CAPN7Q9Y6W3 813 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 SPENQ96T58 3664 aaKnown RBP13.83□□□□□ -0.2
LITAF-217ENST00000575426 HEATR5AQ86XA9 2040 aa13.83□□□□□ -0.2
LITAF-217ENST00000575426 IGLV3-32A0A0A0MS00 114 aa13.82□□□□□ -0.2
LITAF-217ENST00000575426 FIGNL2A6NMB9 653 aa13.82□□□□□ -0.2
LITAF-217ENST00000575426 HCRTR2O43614 444 aa13.82□□□□□ -0.2
LITAF-217ENST00000575426 H6PDO95479 791 aa13.82□□□□□ -0.2
LITAF-217ENST00000575426 ACTL6AO96019 429 aa13.82□□□□□ -0.2
LITAF-217ENST00000575426 C1QCP02747 245 aa13.82□□□□□ -0.2
LITAF-217ENST00000575426 FADDQ13158 208 aa13.82□□□□□ -0.2
LITAF-217ENST00000575426 NFYCQ13952 458 aa13.82□□□□□ -0.2
LITAF-217ENST00000575426 SF3B4Q15427 424 aaKnown RBP eCLIP13.82□□□□□ -0.2
LITAF-217ENST00000575426 RGNQ15493 299 aa13.82□□□□□ -0.2
LITAF-217ENST00000575426 ZNF141Q15928 474 aa13.82□□□□□ -0.2
LITAF-217ENST00000575426 PDZK1Q5T2W1 519 aa13.82□□□□□ -0.2
LITAF-217ENST00000575426 TYW3Q6IPR3 259 aaKnown RBP13.82□□□□□ -0.2
LITAF-217ENST00000575426 ENPP6Q6UWR7 440 aa13.82□□□□□ -0.2
LITAF-217ENST00000575426 LRRC74BQ6ZQY2 392 aa13.82□□□□□ -0.2
LITAF-217ENST00000575426 DHDDSQ86SQ9 333 aa13.82□□□□□ -0.2
LITAF-217ENST00000575426 PM20D2Q8IYS1 436 aa13.82□□□□□ -0.2
LITAF-217ENST00000575426 OR5M9Q8NGP3 310 aa13.82□□□□□ -0.2
LITAF-217ENST00000575426 SSC4DQ8WTU2 575 aa13.82□□□□□ -0.2
LITAF-217ENST00000575426 OIT3Q8WWZ8 545 aa13.82□□□□□ -0.2
LITAF-217ENST00000575426 SH3YL1Q96HL8 342 aaPredicted RBP13.82□□□□□ -0.2
LITAF-217ENST00000575426 SFXN2Q96NB2 322 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms