RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 RPS26P11Q5JNZ5 115 aaPredicted RBP13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 PDZK1Q5T2W1 519 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 REEP3Q6NUK4 255 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 HMGN2P46Q86SG4 172 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 SLC22A16Q86VW1 577 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 PEX5LQ8IYB4 626 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 ZFP62Q8NB50 900 aaPredicted RBP13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 OR4K17Q8NGC6 315 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 BBS10Q8TAM1 723 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 PHOSPHO1Q8TCT1 267 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 DUSP19Q8WTR2 217 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 PMM1Q92871 262 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 DTNBP1Q96EV8 351 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 GPATCH1Q9BRR8 931 aaKnown RBP13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 SAP130Q9H0E3 1048 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 SLC38A1Q9H2H9 487 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 PROK2Q9HC23 129 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 ZFP64Q9NPA5 681 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 ADA2Q9NZK5 511 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 DTNAQ9Y4J8 743 aa13.27□□□□□ -0.29
NPLOC4-218ENST00000574964 IGSF10Q6WRI0 2623 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 A0A1W2PQD3 144 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 FAM166BA8MTA8 275 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 SNPHO15079 494 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 UBOX5O94941 541 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 DBIP07108 87 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 IL7RP16871 459 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 RNF144AP50876 292 aaPredicted RBP13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 PPIAP62937 165 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 SLC25A3Q00325 362 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 INPP5JQ15735 1006 aaPredicted RBP13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 ZNF141Q15928 474 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 PRAMEF8Q5VWM4 474 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 PRAMEF7Q5VXH5 474 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 TIGD3Q6B0B8 471 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 OR5M10Q6IEU7 315 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 ERICH5Q6P6B1 374 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 APOOLQ6UXV4 268 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 KRT73Q86Y46 540 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 PLCZ1Q86YW0 608 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 MISPQ8IVT2 679 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 RP1L1Q8IWN7 2480 aaPredicted RBP13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 SLC30A8Q8IWU4 369 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 SLC15A3Q8IY34 581 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 PGAM4Q8N0Y7 254 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 HIPK4Q8NE63 616 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 SNRNP40Q96DI7 357 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 FRMD6Q96NE9 622 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 TAAR6Q96RI8 345 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 TREX2Q9BQ50 279 aaPredicted RBP13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 TTTY12Q9BZ98 90 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 RUBCNLQ9H714 662 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 BCL2L10Q9HD36 194 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 SPAG4Q9NPE6 437 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 OLAHQ9NV23 265 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 CMTM6Q9NX76 183 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 SUCOQ9UBS9 1254 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 RALYQ9UKM9 306 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 ZNF232Q9UNY5 417 aa13.26□□□□□ -0.29
NPLOC4-218ENST00000574964 SHANK1Q9Y566 2161 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 SERINC4A6NH21 518 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 B8ZZF3 427 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 NPIPA5E9PKD4 350 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 NPIPB9F8W1W9 429 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 GSTA4O15217 222 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 TRIM3O75382 744 aaPredicted RBP13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 UGT2B17O75795 530 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 TRAPPC6AO75865 159 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 CYP7B1O75881 506 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 PDE9AO76083 593 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 PGM3O95394 542 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 ZIC2O95409 532 aaPredicted RBP13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 GDF1P27539 372 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 AQP1P29972 269 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 MLLT10P55197 1068 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 LIPEQ05469 1076 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 LARS2Q15031 903 aaKnown RBP13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 MAPK11Q15759 364 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 VMACQ2NL98 169 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 KLHL26Q53HC5 615 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 INTS11Q5TA45 600 aaKnown RBP13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 PRICKLE2Q7Z3G6 844 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 NET1Q7Z628 596 aaPredicted RBP13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 PTOV1Q86YD1 416 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 ZZZ3Q8IYH5 903 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 DEFB107AQ8IZN7 70 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 OR2T12Q8NG77 320 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 OR52P1PQ8NH57 321 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 CPT1CQ8TCG5 803 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 RNF138Q8WVD3 245 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 WDR60Q8WVS4 1066 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 OIT3Q8WWZ8 545 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 SH3YL1Q96HL8 342 aaPredicted RBP13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 REXO5Q96IC2 774 aaKnown RBP13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 ZNF583Q96ND8 569 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 GNRHR2Q96P88 292 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 ZNF607Q96SK3 696 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 SPATA5L1Q9BVQ7 753 aa13.25□□□□□ -0.29
NPLOC4-218ENST00000574964 QRSL1Q9H0R6 528 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms