RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 SVILO95425 2214 aa10.06□□□□□ -0.8
CHD3-216ENST00000573936 DIDO1Q9BTC0 2240 aaKnown RBP10.06□□□□□ -0.8
CHD3-216ENST00000573936 POLEQ07864 2286 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 A0A1B0GTH9 108 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 A0A1B0GUH1 482 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 OR14I1A6ND48 311 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 BBIP1A8MTZ0 92 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 EVPLLA8MZ36 301 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 HMGN4O00479 90 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 AQP7O14520 342 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 PDE9AO76083 593 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 CLDN1O95832 211 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 ANGPTL1O95841 491 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 STSP08842 583 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 ABOP16442 354 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 MSX1P28360 303 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 SRD5A2P31213 254 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 PTGS2P35354 604 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 CASP9P55211 416 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 DSCR4P56555 118 aaPredicted RBP10.05□□□□□ -0.8
CHD3-216ENST00000573936 KLF10Q13118 480 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 FADDQ13158 208 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 GNA13Q14344 377 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 GANABQ14697 944 aaKnown RBP10.05□□□□□ -0.8
CHD3-216ENST00000573936 MMEL1Q495T6 779 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 GPAT3Q53EU6 434 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 PAGE3Q5JUK9 113 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 FNDC7Q5VTL7 733 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 AP1ARQ63HQ0 302 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 Q6ZPB1 254 aaPredicted RBP10.05□□□□□ -0.8
CHD3-216ENST00000573936 GALNT10Q86SR1 603 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 SPPL2CQ8IUH8 684 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 EID3Q8N140 333 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 DPP10Q8N608 796 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 WDSUB1Q8N9V3 476 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 CCDC197Q8NCU1 140 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 DUSP19Q8WTR2 217 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 SARAFQ96BY9 339 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 ROPN1LQ96C74 230 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 TRNT1Q96Q11 434 aaKnown RBP10.05□□□□□ -0.8
CHD3-216ENST00000573936 ZNF350Q9GZX5 532 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 FBXO34Q9NWN3 711 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 CALML5Q9NZT1 146 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 FLRT3Q9NZU0 649 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 P2RX2Q9UBL9 471 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 ERRFI1Q9UJM3 462 aaPredicted RBP10.05□□□□□ -0.8
CHD3-216ENST00000573936 OSGIN2Q9Y236 505 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 WDR45Q9Y484 360 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 DTNAQ9Y4J8 743 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 GMEB1Q9Y692 573 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 CAPN7Q9Y6W3 813 aa10.05□□□□□ -0.8
CHD3-216ENST00000573936 IGLV3-32A0A0A0MS00 114 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 GTPBP1O00178 669 aaKnown RBP10.04□□□□□ -0.8
CHD3-216ENST00000573936 PRRG2O14669 202 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 BCKDKO14874 412 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 SLC19A2O60779 497 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 LDLRP01130 860 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 NPPAP01160 153 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 NR2F1P10589 423 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 DSTNP60981 165 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 STX5Q13190 355 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 NFYCQ13952 458 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 CYLC2Q14093 348 aaPredicted RBP10.04□□□□□ -0.8
CHD3-216ENST00000573936 RGNQ15493 299 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 GPR68Q15743 365 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 ZNF141Q15928 474 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 GLYR1Q49A26 553 aaPredicted RBP10.04□□□□□ -0.8
CHD3-216ENST00000573936 GTDC1Q4AE62 458 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 KLHL26Q53HC5 615 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 COQ5Q5HYK3 327 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 COX20Q5RI15 118 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.04□□□□□ -0.8
CHD3-216ENST00000573936 LRRC74BQ6ZQY2 392 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 ZAR1Q86SH2 424 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 DHDDSQ86SQ9 333 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 ANKS4BQ8N8V4 417 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 FADS6Q8N9I5 356 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 FAM83FQ8NEG4 500 aaPredicted RBP10.04□□□□□ -0.8
CHD3-216ENST00000573936 NEIL3Q8TAT5 605 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 FAM57AQ8TBR7 257 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 PNPT1Q8TCS8 783 aaKnown RBP10.04□□□□□ -0.8
CHD3-216ENST00000573936 RAB8BQ92930 207 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 OR2B2Q9GZK3 357 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 SAP130Q9H0E3 1048 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 DSN1Q9H410 356 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 SLC6A13Q9NSD5 602 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 VAPAQ9P0L0 249 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.04□□□□□ -0.8
CHD3-216ENST00000573936 DKKL1Q9UK85 242 aa10.04□□□□□ -0.8
CHD3-216ENST00000573936 APCP25054 2843 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 WIPF3A6NGB9 483 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 FAM47E-STBD1D6RA91 191 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 NPIPB9F8W1W9 429 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 EIF4E2O60573 245 aaKnown RBP10.03□□□□□ -0.8
CHD3-216ENST00000573936 WISP2O76076 250 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 TACC2O95359 2948 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 H6PDO95479 791 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 CELA3AP09093 270 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 ETFAP13804 333 aa10.03□□□□□ -0.8
CHD3-216ENST00000573936 HOXB9P17482 250 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms