RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 C1RLQ9NZP8 487 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 STOX2Q9P2F5 926 aaPredicted RBP4.89□□□□□ -1.63
SF3B3-214ENST00000572365 NOCTQ9UK39 431 aaKnown RBP4.89□□□□□ -1.63
SF3B3-214ENST00000572365 STAP1Q9ULZ2 295 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 PCDHA7Q9UN72 937 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 USH1CQ9Y6N9 552 aa4.89□□□□□ -1.63
SF3B3-214ENST00000572365 MEGF8Q7Z7M0 2845 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 USF3Q68DE3 2245 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 MAGEA13PA6NCF6 341 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 CD8B2A6NJW9 211 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 CCT8L1PA6NM43 557 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 OR5K4A6NMS3 321 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 ANKRD65E5RJM6 399 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 HS3ST1O14792 307 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 TTI1O43156 1089 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 PLPP2O43688 288 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 PRAMEF11O60813 436 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 ATP6V1G1O75348 118 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 WDPCPO95876 746 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 SLC4A1P02730 911 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 ABCB1P08183 1280 aaPredicted RBP4.88□□□□□ -1.63
SF3B3-214ENST00000572365 CCDC159P0C7I6 412 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 ABOP16442 354 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 ZNF30P17039 623 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 ZNF7P17097 686 aaPredicted RBP4.88□□□□□ -1.63
SF3B3-214ENST00000572365 TCP1P17987 556 aaKnown RBP4.88□□□□□ -1.63
SF3B3-214ENST00000572365 CDH3P22223 829 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 PBLDP30039 288 aaPredicted RBP4.88□□□□□ -1.63
SF3B3-214ENST00000572365 STIP1P31948 543 aaKnown RBP4.88□□□□□ -1.63
SF3B3-214ENST00000572365 PCK1P35558 622 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 CYLC1P35663 651 aaPredicted RBP4.88□□□□□ -1.63
SF3B3-214ENST00000572365 HSPA9P38646 679 aaKnown RBP4.88□□□□□ -1.63
SF3B3-214ENST00000572365 PCYT1AP49585 367 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 PPP5CP53041 499 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 ARPC4P59998 168 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 TFF3Q07654 80 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 TRAF3Q13114 568 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 MFAP5Q13361 173 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 KEAP1Q14145 624 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 IHHQ14623 411 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 DEFB113Q30KQ7 82 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 CCDC14Q49A88 953 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 ZCWPW2Q504Y3 356 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 TFDP3Q5H9I0 405 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 C9orf152Q5JTZ5 239 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 CFAP157Q5JU67 520 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 WDR73Q6P4I2 378 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 KRT77Q7Z794 578 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 ZNF554Q86TJ5 538 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 CLIP4Q8N3C7 705 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 RTL3Q8N8U3 475 aaKnown RBP4.88□□□□□ -1.63
SF3B3-214ENST00000572365 MAPK1IP1LQ8NDC0 245 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 MCUQ8NE86 351 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 OR2Y1Q8NGV0 311 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 GOT1L1Q8NHS2 421 aaPredicted RBP4.88□□□□□ -1.63
SF3B3-214ENST00000572365 JOSD2Q8TAC2 188 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 AENQ8WTP8 325 aaKnown RBP4.88□□□□□ -1.63
SF3B3-214ENST00000572365 SLC20A1Q8WUM9 679 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 RXFP2Q8WXD0 754 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 PGAP3Q96FM1 320 aaPredicted RBP4.88□□□□□ -1.63
SF3B3-214ENST00000572365 GFI1Q99684 422 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 AP1M1Q9BXS5 423 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 RAB17Q9H0T7 212 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 FAM60AQ9NP50 221 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 KCNJ16Q9NPI9 418 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 IL17CQ9P0M4 197 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 CRNNQ9UBG3 495 aaPredicted RBP4.88□□□□□ -1.63
SF3B3-214ENST00000572365 EPHA6Q9UF33 1036 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 ARMCX3Q9UH62 379 aaPredicted RBP4.88□□□□□ -1.63
SF3B3-214ENST00000572365 AMACRQ9UHK6 382 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 RNF6Q9Y252 685 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 PADI2Q9Y2J8 665 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 ALPK2Q86TB3 2170 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 MED12Q93074 2177 aa4.88□□□□□ -1.63
SF3B3-214ENST00000572365 SMIM31A0A1B0GVY4 71 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 GSAPA4D1B5 854 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 FAM90A10PA6NDY2 464 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 MAGEB17A8MXT2 336 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 E7EQ34 232 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 H7C0S8 307 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 ANKRD28O15084 1053 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 ZNF189O75820 626 aaPredicted RBP4.87□□□□□ -1.63
SF3B3-214ENST00000572365 PDE9AO76083 593 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 SLC25A14O95258 325 aaPredicted RBP4.87□□□□□ -1.63
SF3B3-214ENST00000572365 ZBTB11O95625 1053 aaPredicted RBP4.87□□□□□ -1.63
SF3B3-214ENST00000572365 HOXD4P09016 255 aaPredicted RBP4.87□□□□□ -1.63
SF3B3-214ENST00000572365 LINGO3P0C6S8 592 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 PIRTP0C851 137 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 CMA1P23946 247 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 HRH2P25021 359 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 RFC3P40938 356 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 SIRPAP78324 504 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 CBX3Q13185 183 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 SNX1Q13596 522 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 CYLC2Q14093 348 aaPredicted RBP4.87□□□□□ -1.63
SF3B3-214ENST00000572365 PARP6Q2NL67 630 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 TCP11X2Q5H9J9 407 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 ANKRD20A2Q5SQ80 823 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 ANKRD20A1Q5TYW2 823 aa4.87□□□□□ -1.63
SF3B3-214ENST00000572365 ANKRD20A3Q5VUR7 823 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms