RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 PTH2RP49190 550 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 ZNF41P51814 821 aaPredicted RBP13.93□□□□□ -0.18
TSR1-202ENST00000571806 FOXA1P55317 472 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.93□□□□□ -0.18
TSR1-202ENST00000571806 PRSS53Q2L4Q9 553 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 EXOC3L2Q2M3D2 409 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 GRAMD1BQ3KR37 738 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 CCDC153Q494R4 210 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 CFAP157Q5JU67 520 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 CPTPQ5TA50 214 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 ANKRD34AQ69YU3 496 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 PPP4R4Q6NUP7 873 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 ZCCHC12Q6PEW1 402 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 ZYG11AQ6WRX3 759 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 ESPNLQ6ZVH7 1005 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 OR10D3Q8NH80 312 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 ZBED6CLQ96FA7 236 aaPredicted RBP13.93□□□□□ -0.18
TSR1-202ENST00000571806 HDHD5Q9BXW7 423 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 NTMQ9P121 344 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 VDAC3Q9Y277 283 aa13.93□□□□□ -0.18
TSR1-202ENST00000571806 DSCAMO60469 2012 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.92□□□□□ -0.18
TSR1-202ENST00000571806 G3V2L1 256 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 SLC28A1O00337 649 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 SMAD7O15105 426 aaKnown RBP13.92□□□□□ -0.18
TSR1-202ENST00000571806 PDPK1O15530 556 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 KLF4O43474 513 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 RGS14O43566 566 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 TBX19O60806 448 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 CNOT4O95628 575 aaKnown RBP13.92□□□□□ -0.18
TSR1-202ENST00000571806 EIF1P41567 113 aaKnown RBP13.92□□□□□ -0.18
TSR1-202ENST00000571806 SERPINB4P48594 390 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 CCT5P48643 541 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 DNAJB13P59910 316 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 KIAA0040Q15053 153 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 APOOLQ6UXV4 268 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 STAC2Q6ZMT1 411 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 ZNF704Q6ZNC4 412 aaPredicted RBP13.92□□□□□ -0.18
TSR1-202ENST00000571806 FRMD7Q6ZUT3 714 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 C22orf34Q6ZV56 151 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 IFT20Q8IY31 132 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 ZNF611Q8N823 705 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 IGFBPL1Q8WX77 278 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 C16orf45Q96MC5 204 aaPredicted RBP13.92□□□□□ -0.18
TSR1-202ENST00000571806 USB1Q9BQ65 265 aaKnown RBP13.92□□□□□ -0.18
TSR1-202ENST00000571806 EQTNQ9NQ60 294 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 TIGARQ9NQ88 270 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 UBQLN4Q9NRR5 601 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 ZNF701Q9NV72 531 aaPredicted RBP13.92□□□□□ -0.18
TSR1-202ENST00000571806 SNX8Q9Y5X2 465 aa13.92□□□□□ -0.18
TSR1-202ENST00000571806 ARID1AO14497 2285 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 A0A1W2PQD3 144 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 GXYLT2A0PJZ3 443 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 SCDO00767 359 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 HS3ST1O14792 307 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 SOX30O94993 753 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 OXSR1O95747 527 aaPredicted RBP13.91□□□□□ -0.18
TSR1-202ENST00000571806 THBDP07204 575 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 PSMB1P20618 241 aaKnown RBP13.91□□□□□ -0.18
TSR1-202ENST00000571806 FRKP42685 505 aaPredicted RBP13.91□□□□□ -0.18
TSR1-202ENST00000571806 MANFP55145 182 aaKnown RBP13.91□□□□□ -0.18
TSR1-202ENST00000571806 HSPB3Q12988 150 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 RNF165Q6ZSG1 346 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 ZNF551Q7Z340 670 aaPredicted RBP13.91□□□□□ -0.18
TSR1-202ENST00000571806 TRABD2AQ86V40 505 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 NUP43Q8NFH3 380 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 OR4C3Q8NH37 302 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 OR2V1Q8NHB1 315 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 FAM110BQ8TC76 370 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 PIK3R3Q92569 461 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 SLC9A6Q92581 669 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 REXO5Q96IC2 774 aaKnown RBP13.91□□□□□ -0.18
TSR1-202ENST00000571806 ADGRG7Q96K78 797 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 MS4A4EQ96PG1 132 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 CCT7Q99832 543 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 TMEM204Q9BSN7 226 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 REEP4Q9H6H4 257 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 NGBQ9NPG2 151 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 ACSS1Q9NUB1 689 aaPredicted RBP13.91□□□□□ -0.18
TSR1-202ENST00000571806 C1orf109Q9NX04 203 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 TMED5Q9Y3A6 229 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 CCL27Q9Y4X3 112 aa13.91□□□□□ -0.18
TSR1-202ENST00000571806 PCNX3Q9H6A9 2034 aa13.9□□□□□ -0.18
TSR1-202ENST00000571806 A0A1W2PRB8 838 aa13.9□□□□□ -0.18
TSR1-202ENST00000571806 TRIM64A6NGJ6 449 aa13.9□□□□□ -0.18
TSR1-202ENST00000571806 TRIM64BA6NI03 449 aa13.9□□□□□ -0.18
TSR1-202ENST00000571806 GMFGO60234 142 aa13.9□□□□□ -0.18
TSR1-202ENST00000571806 KCNK2O95069 426 aa13.9□□□□□ -0.18
TSR1-202ENST00000571806 IGKV1D-16P01601 117 aa13.9□□□□□ -0.18
TSR1-202ENST00000571806 TUBBP07437 444 aa13.9□□□□□ -0.18
TSR1-202ENST00000571806 NEFHP12036 1026 aa13.9□□□□□ -0.18
TSR1-202ENST00000571806 PSMA4P25789 261 aaKnown RBP13.9□□□□□ -0.18
TSR1-202ENST00000571806 ADH6P28332 368 aa13.9□□□□□ -0.18
TSR1-202ENST00000571806 SLC6A8P48029 635 aa13.9□□□□□ -0.18
TSR1-202ENST00000571806 PRKAG1P54619 331 aa13.9□□□□□ -0.18
TSR1-202ENST00000571806 SLC18A2Q05940 514 aa13.9□□□□□ -0.18
TSR1-202ENST00000571806 RNPS1Q15287 305 aaKnown RBP13.9□□□□□ -0.18
TSR1-202ENST00000571806 ETFDHQ16134 617 aa13.9□□□□□ -0.18
TSR1-202ENST00000571806 CTU2Q2VPK5 515 aaKnown RBP13.9□□□□□ -0.18
TSR1-202ENST00000571806 PLPPR5Q32ZL2 321 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms