RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 LRRC25Q8N386 305 aaPredicted RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 NLGN4YQ8NFZ3 816 aaPredicted RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 OR4K14Q8NGD5 310 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 HMGB4Q8WW32 186 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 ZNF681Q96N22 645 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 PSD2Q9BQI7 771 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 HDHD5Q9BXW7 423 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 ACTRT3Q9BYD9 372 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 PITHD1Q9GZP4 211 aaPredicted RBP8.18□□□□□ -1.1
LINC00558-201ENST00000569422 SMURF1Q9HCE7 757 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 MUTYHQ9UIF7 546 aa8.18□□□□□ -1.1
LINC00558-201ENST00000569422 SNRNP200O75643 2136 aaKnown RBP8.17□□□□□ -1.1
LINC00558-201ENST00000569422 BRWD1Q9NSI6 2320 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 TAF4O00268 1085 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 PEX12O00623 359 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 ST8SIA5O15466 376 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 CTRB1P17538 263 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 SDC2P34741 201 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 MTNR1AP48039 350 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 CDH11P55287 796 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 RHAGQ02094 409 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 ZNF45Q02386 682 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 TRAM2Q15035 370 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 AGERQ15109 404 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 FAM214AQ32MH5 1076 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 KLHL12Q53G59 568 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 CTRB2Q6GPI1 263 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 ZNF425Q6IV72 752 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 CDC73Q6P1J9 531 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 GDPD3Q7L5L3 318 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 ZNF438Q7Z4V0 828 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 LAPTM4BQ86VI4 370 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 TRIM69Q86WT6 500 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 DTX3Q8N9I9 347 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 PIGXQ8TBF5 258 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 SMAP2Q8WU79 429 aaPredicted RBP8.17□□□□□ -1.1
LINC00558-201ENST00000569422 TM9SF4Q92544 642 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 TP53INP1Q96A56 240 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 BMFQ96LC9 184 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 SLC38A2Q96QD8 506 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 FUZQ9BT04 418 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 TAPBPLQ9BX59 468 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 POLDIP3Q9BY77 421 aaKnown RBP8.17□□□□□ -1.1
LINC00558-201ENST00000569422 DPH1Q9BZG8 443 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 ZSCAN32Q9NX65 697 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 CCDC59Q9P031 241 aaKnown RBP8.17□□□□□ -1.1
LINC00558-201ENST00000569422 STUB1Q9UNE7 303 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 LSM2Q9Y333 95 aaKnown RBP8.17□□□□□ -1.1
LINC00558-201ENST00000569422 A8MV72 311 aaPredicted RBP8.17□□□□□ -1.1
LINC00558-201ENST00000569422 SULT1B1O43704 296 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 CELA2BP08218 269 aaPredicted RBP8.17□□□□□ -1.1
LINC00558-201ENST00000569422 UGT2B7P16662 529 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 RORCP51449 518 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 SHC2P98077 582 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 ZNF181Q2M3W8 571 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 Q3ZCU0 254 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 FLYWCH1Q4VC44 716 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 AGAP7PQ5VUJ5 663 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 MEDAGQ5VYS4 303 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 FIGLAQ6QHK4 219 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 FAM131AQ6UXB0 335 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 TMPRSS11AQ6ZMR5 421 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 PAQR7Q86WK9 346 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 PROKR2Q8NFJ6 384 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 RPLP0P6Q8NHW5 317 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 GRHL3Q8TE85 626 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 RNF31Q96EP0 1072 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 SLC41A3Q96GZ6 507 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 SAMD8Q96LT4 415 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 TTTY10Q9BZA0 68 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 KIR3DX1Q9H7L2 352 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 BCL2L10Q9HD36 194 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 ATP13A2Q9NQ11 1180 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 TXNL4BQ9NX01 149 aaKnown RBP8.17□□□□□ -1.1
LINC00558-201ENST00000569422 OR6C2Q9NZP2 312 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 H2AFY2Q9P0M6 372 aaPredicted RBP8.17□□□□□ -1.1
LINC00558-201ENST00000569422 COMMD3Q9UBI1 195 aa8.17□□□□□ -1.1
LINC00558-201ENST00000569422 SAGE2PA6NJ88 616 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 SOCS6O14544 535 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 CDC42EP2O14613 210 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 B3GALT2O43825 422 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 NCR1O76036 304 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 UBXN7O94888 489 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 APOA1P02647 267 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 THY1P04216 161 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 CTSBP07858 339 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 CELP19835 753 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 PTGS2P35354 604 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 TEKQ02763 1124 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 ZNF124Q15973 351 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 NNATQ16517 81 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 MAPK14Q16539 360 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 OR7E24Q6IFN5 339 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 MFSD12Q6NUT3 480 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 SLC36A4Q6YBV0 504 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 TMEM64Q6YI46 380 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 FRRS1Q6ZNA5 592 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 GDF7Q7Z4P5 450 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 TMEM52Q8NDY8 209 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 OR51G2Q8NGK0 314 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms