RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ELP4Q96EB1 424 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 TMEM41AQ96HV5 264 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 CDRT15Q96T59 188 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 SH3GL1Q99961 368 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 SLC39A3Q9BRY0 314 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 OSBPL11Q9BXB4 747 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 CXorf36Q9H7Y0 433 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 GALNT9Q9HCQ5 603 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 ACKR4Q9NPB9 350 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 SPAG4Q9NPE6 437 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 CHST11Q9NPF2 352 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 SIRT3Q9NTG7 399 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-225ENST00000569245 SPRR3Q9UBC9 169 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 C19orf53Q9UNZ5 99 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-225ENST00000569245 AP3M1Q9Y2T2 418 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 C15orf41Q9Y2V0 281 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 NAV2Q8IVL1 2488 aa13.22□□□□□ -0.29
COMMD4-225ENST00000569245 CFAP73A6NFT4 308 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 PRAMEF25A6NGN4 478 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 UPK1AO00322 258 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 PLOD2O00469 737 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 PPIBP23284 216 aaKnown RBP13.21□□□□□ -0.29
COMMD4-225ENST00000569245 ELAVL4P26378 380 aaKnown RBP13.21□□□□□ -0.29
COMMD4-225ENST00000569245 PGM1P36871 562 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 CDK9P50750 372 aaKnown RBP13.21□□□□□ -0.29
COMMD4-225ENST00000569245 SLC7A2P52569 658 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 PRKAG1P54619 331 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 MRPS22P82650 360 aaKnown RBP13.21□□□□□ -0.29
COMMD4-225ENST00000569245 SNTA1Q13424 505 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 GAB1Q13480 694 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 EFR3AQ14156 821 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 ZNF630Q2M218 657 aaPredicted RBP13.21□□□□□ -0.29
COMMD4-225ENST00000569245 SPATS1Q496A3 300 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 PGM2L1Q6PCE3 622 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 NPSR1Q6W5P4 371 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 SZRD1Q7Z422 152 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 OR2L13Q8N349 312 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 RPRMLQ8N4K4 120 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 MARVELD2Q8N4S9 558 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 OR4N2Q8NGD1 307 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 OR10Q1Q8NGQ4 319 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 MARVELD3Q96A59 401 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 MCUR1Q96AQ8 359 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 MOAP1Q96BY2 351 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 EFHD2Q96C19 240 aaPredicted RBP13.21□□□□□ -0.29
COMMD4-225ENST00000569245 CPPED1Q9BRF8 314 aaPredicted RBP13.21□□□□□ -0.29
COMMD4-225ENST00000569245 THTPAQ9BU02 230 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 RUBCNLQ9H714 662 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 TPT1P8Q9HAU6 139 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 CMTM6Q9NX76 183 aa13.21□□□□□ -0.29
COMMD4-225ENST00000569245 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.21□□□□□ -0.29
COMMD4-225ENST00000569245 NBPF19A0A087WUL8 3843 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 NOTCH2Q04721 2471 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 CLIC1O00299 241 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 HNRNPRO43390 633 aaKnown RBP13.2□□□□□ -0.3
COMMD4-225ENST00000569245 WDR1O75083 606 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 HPNP05981 417 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 GPX2P18283 190 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 ENDOUP21128 410 aaKnown RBP13.2□□□□□ -0.3
COMMD4-225ENST00000569245 RFX3P48380 749 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 EEFSECP57772 596 aaKnown RBP13.2□□□□□ -0.3
COMMD4-225ENST00000569245 CDSNQ15517 529 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 SAMD4BQ5PRF9 694 aaKnown RBP13.2□□□□□ -0.3
COMMD4-225ENST00000569245 FNDC7Q5VTL7 733 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 B3GNT6Q6ZMB0 384 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 WDR53Q7Z5U6 358 aaPredicted RBP13.2□□□□□ -0.3
COMMD4-225ENST00000569245 SFXN5Q8TD22 340 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 SLC35A4Q96G79 324 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 SLC35A5Q9BS91 424 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 IKZF5Q9H5V7 419 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 Q9N2J8 555 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 EQTNQ9NQ60 294 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 ADA2Q9NZK5 511 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 NTMQ9P121 344 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 MRTO4Q9UKD2 239 aaKnown RBP13.2□□□□□ -0.3
COMMD4-225ENST00000569245 CORO2BQ9UQ03 480 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 SLC6A5Q9Y345 797 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 L3MBTL1Q9Y468 752 aa13.2□□□□□ -0.3
COMMD4-225ENST00000569245 RNF103-CHMP3A0A140T963 221 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 EVPLLA8MZ36 301 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 NME4O00746 187 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 SNPHO15079 494 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 EMC8O43402 210 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 TSPAN2O60636 221 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 DNAJA2O60884 412 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 KRT75O95678 551 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 COX6B1P14854 86 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 GABRA1P14867 456 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 NQO1P15559 274 aaKnown RBP13.19□□□□□ -0.3
COMMD4-225ENST00000569245 CHRNB4P30926 498 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 GABRA3P34903 492 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 GCKP35557 465 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 MAGEA8P43361 318 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 CCT3P49368 545 aaKnown RBP13.19□□□□□ -0.3
COMMD4-225ENST00000569245 PNLIPRP2P54317 469 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 NUP107P57740 925 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 MTPNP58546 118 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 PSG6Q00889 435 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 SELPLGQ14242 412 aa13.19□□□□□ -0.3
COMMD4-225ENST00000569245 DECR1Q16698 335 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms