RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 GUSBP08236 651 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 GNSP15586 552 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 GRK5P34947 590 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 UGT2B10P36537 528 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 RNF144AP50876 292 aaPredicted RBP16.81■□□□□ 0.28
SMPD3-211ENST00000568373 OR1Q1Q15612 314 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 ANKDD1AQ495B1 522 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 CLEC12AQ5QGZ9 265 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 ZC3H14Q6PJT7 736 aaKnown RBP16.81■□□□□ 0.28
SMPD3-211ENST00000568373 ADCK1Q86TW2 530 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 SLC34A3Q8N130 599 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 METTL27Q8N6F8 245 aaPredicted RBP16.81■□□□□ 0.28
SMPD3-211ENST00000568373 SH3YL1Q96HL8 342 aaPredicted RBP16.81■□□□□ 0.28
SMPD3-211ENST00000568373 SPRTNQ9H040 489 aaPredicted RBP16.81■□□□□ 0.28
SMPD3-211ENST00000568373 DCSTAMPQ9H295 470 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 ZBTB20Q9HC78 741 aaPredicted RBP16.81■□□□□ 0.28
SMPD3-211ENST00000568373 LRIT1Q9P2V4 623 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 KLHL3Q9UH77 587 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 LSM2Q9Y333 95 aaKnown RBP16.81■□□□□ 0.28
SMPD3-211ENST00000568373 TMEM184BQ9Y519 407 aaPredicted RBP16.81■□□□□ 0.28
SMPD3-211ENST00000568373 SDK1Q7Z5N4 2213 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 H0YIG0 161 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 MAOAP21397 527 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 RFX3P48380 749 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 TUBA1BP68363 451 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 PLAURQ03405 335 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 ZNF620Q6ZNG0 422 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 TUBA1AQ71U36 451 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 CACTIN-AS1Q8N1I8 211 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 OR51Q1Q8NH59 317 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 PALMDQ9NP74 551 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 CLEC2DQ9UHP7 191 aa16.81■□□□□ 0.28
SMPD3-211ENST00000568373 OR2W5A6NFC9 320 aa16.8■□□□□ 0.28
SMPD3-211ENST00000568373 BCAT2O15382 392 aaPredicted RBP16.8■□□□□ 0.28
SMPD3-211ENST00000568373 PRAMEF2O60811 474 aa16.8■□□□□ 0.28
SMPD3-211ENST00000568373 GPR3P46089 330 aa16.8■□□□□ 0.28
SMPD3-211ENST00000568373 AFF3P51826 1226 aaKnown RBP16.8■□□□□ 0.28
SMPD3-211ENST00000568373 HSD17B7P56937 341 aa16.8■□□□□ 0.28
SMPD3-211ENST00000568373 DOC2BQ14184 412 aa16.8■□□□□ 0.28
SMPD3-211ENST00000568373 ZNF267Q14586 743 aaPredicted RBP16.8■□□□□ 0.28
SMPD3-211ENST00000568373 GRM7Q14831 915 aa16.8■□□□□ 0.28
SMPD3-211ENST00000568373 TSTQ16762 297 aaKnown RBP16.8■□□□□ 0.28
SMPD3-211ENST00000568373 C19orf48Q6RUI8 117 aa16.8■□□□□ 0.28
SMPD3-211ENST00000568373 WDR88Q6ZMY6 472 aa16.8■□□□□ 0.28
SMPD3-211ENST00000568373 C11orf74Q86VG3 221 aa16.8■□□□□ 0.28
SMPD3-211ENST00000568373 PLEKHA8Q96JA3 519 aa16.8■□□□□ 0.28
SMPD3-211ENST00000568373 MND1Q9BWT6 205 aa16.8■□□□□ 0.28
SMPD3-211ENST00000568373 SLIRPQ9GZT3 109 aaKnown RBP16.8■□□□□ 0.28
SMPD3-211ENST00000568373 OR51E2Q9H255 320 aa16.8■□□□□ 0.28
SMPD3-211ENST00000568373 EVA1AQ9H8M9 152 aa16.8■□□□□ 0.28
SMPD3-211ENST00000568373 DTX4Q9Y2E6 619 aa16.8■□□□□ 0.28
SMPD3-211ENST00000568373 PCDHGA3Q9Y5H0 932 aa16.8■□□□□ 0.28
SMPD3-211ENST00000568373 CORINQ9Y5Q5 1042 aa16.8■□□□□ 0.28
SMPD3-211ENST00000568373 K7ESF4 209 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 CCRL2O00421 344 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 PRODHO43272 600 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 LYPD3O95274 346 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 DRD5P21918 477 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 CXCL12P48061 93 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 LIMK1P53667 647 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 PDZK1Q5T2W1 519 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 SLC30A6Q6NXT4 461 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 USP43Q70EL4 1123 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 RNF113BQ8IZP6 322 aaKnown RBP16.79■□□□□ 0.28
SMPD3-211ENST00000568373 CLDN22Q8N7P3 220 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 OR4N2Q8NGD1 307 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 OR52I1Q8NGK6 324 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 OR4Q3Q8NH05 313 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 HSPBAP1Q96EW2 488 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 AHCYL2Q96HN2 611 aaKnown RBP16.79■□□□□ 0.28
SMPD3-211ENST00000568373 ZNF578Q96N58 590 aaPredicted RBP16.79■□□□□ 0.28
SMPD3-211ENST00000568373 CNPPD1Q9BV87 410 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 TAPBPLQ9BX59 468 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 C14orf105Q9NVL8 296 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 DIMT1Q9UNQ2 313 aaKnown RBP16.79■□□□□ 0.28
SMPD3-211ENST00000568373 GPR52Q9Y2T5 361 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 CDH10Q9Y6N8 788 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 LOC100506127A0A0U1RQW1 187 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 SNTNA6NMZ2 147 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 CLDN25C9JDP6 229 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 J3QRK9 145 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 CDC42EP2O14613 210 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 CSO75390 466 aaKnown RBP16.79■□□□□ 0.28
SMPD3-211ENST00000568373 IGKV1D-16P01601 117 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 SCG5P05408 212 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 CKMT1AP12532 417 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 CD1CP29017 333 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 OR1D5P58170 312 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 KCNAB1Q14722 419 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 SPHARQ15513 63 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 ATCAYQ86WG3 371 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 CYP4Z2PQ8N1L4 340 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 NANOGP1Q8N7R0 232 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 PROKR2Q8NFJ6 384 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 FNDC8Q8TC99 324 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 TMEM239Q8WW34 195 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 OPALINQ96PE5 141 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 ZNF559Q9BR84 538 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 TEX12Q9BXU0 123 aa16.79■□□□□ 0.28
SMPD3-211ENST00000568373 RACGAP1Q9H0H5 632 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms