RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 GNPDA2Q8TDQ7 276 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 RASSF5Q8WWW0 418 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 C4orf36Q96KX1 117 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 PTCHD1Q96NR3 888 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 CAMK1GQ96NX5 476 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 SPATA5L1Q9BVQ7 753 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 ZSCAN32Q9NX65 697 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 AK6Q9Y3D8 172 aaKnown RBP8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 TBC1D3DA0A087WVF3 549 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 TBC1D3IA0A087WXS9 549 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 TBC1D3EA0A087X179 549 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 TBC1D3KA0A087X1G2 549 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 TBC1D3FA6NER0 549 aaPredicted RBP8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 TBC1D3LB9A6J9 549 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 PPP1R3DO95685 299 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 TBC1D3HP0C7X1 549 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 GIFP27352 417 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 GABRA5P31644 462 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 IFNGR2P38484 337 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 RAB40BQ12829 278 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 SGCGQ13326 291 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 DEFB110Q30KQ9 67 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 PGGHGQ32M88 737 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 TRMT12Q53H54 448 aaKnown RBP8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 TBC1D3GQ6DHY5 549 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 TBC1D3CQ6IPX1 549 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 LILRA6Q6PI73 481 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 PRR23CQ6ZRP0 262 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 TBC1D3Q8IZP1 549 aaPredicted RBP8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 C17orf47Q8NEP4 570 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 OR2T33Q8NG76 320 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 OR7G2Q8NG99 324 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 OR52L1Q8NGH7 329 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 OR6K6Q8NGW6 343 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 VWCEQ96DN2 955 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 GSDMCQ9BYG8 508 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 SLC38A1Q9H2H9 487 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 OR52D1Q9H346 318 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 BRD7Q9NPI1 651 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 RBFOX1Q9NWB1 397 aaKnown RBP8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 NCKAP1Q9Y2A7 1128 aa8.37□□□□□ -1.07
HDGFL3-206ENST00000568294 A0A1W2PPV9 198 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 A8MUA0 341 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 IMPA2O14732 288 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 RPP14O95059 124 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 EFEMP2O95967 443 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 POU3F3P20264 500 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 ITGB7P26010 798 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 PXNP49023 591 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 VSX2P58304 361 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 ADAM15Q13444 863 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 GPR176Q14439 515 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 FGFBP1Q14512 234 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 IRF4Q15306 451 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 NTRK2Q16620 822 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 OCLNQ16625 522 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 MINDY4Q4G0A6 757 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 RNF44Q7L0R7 432 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 SFTPA2Q8IWL1 248 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 FAM98AQ8NCA5 519 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 OR4D9Q8NGE8 314 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 OR5T3Q8NGG3 340 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 OR4K13Q8NH42 304 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 TRMT10AQ8TBZ6 339 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 LCN9Q8WX39 176 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 THAP7Q9BT49 309 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 DPCDQ9BVM2 203 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 DPEP2Q9H4A9 486 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 SLC28A3Q9HAS3 691 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 TESQ9UGI8 421 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 APOBEC3BQ9UH17 382 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 ZNF346Q9UL40 294 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 MGAT4AQ9UM21 535 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 WDR87Q6ZQQ6 2873 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 TRIOO75962 3097 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 SPTBN5Q9NRC6 3674 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 ABHD14A-ACY1A0A1B0GW23 586 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 C1QTNF3-AMACRE9PGA6 284 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 E9PQ18 207 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 MAN2B1O00754 1011 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 PROM1O43490 865 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 FKTNO75072 461 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 ZNF780AO75290 641 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 ZIC2O95409 532 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 RPN2P04844 631 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 ATP5A1P25705 553 aaKnown RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 MPIP34949 423 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 CCR4P51679 360 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 CDK5Q00535 292 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 REEP5Q00765 189 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 NDUFAF6Q330K2 333 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 C3orf38Q5JPI3 329 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 C1orf94Q6P1W5 598 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 MZT2AQ6P582 158 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 C19orf48Q6RUI8 117 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 GDPGP1Q6ZNW5 385 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 PRSS41Q7RTY9 318 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 METTL27Q8N6F8 245 aaPredicted RBP8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 C10orf53Q8N6V4 93 aa8.36□□□□□ -1.07
HDGFL3-206ENST00000568294 FBXO15Q8NCQ5 510 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms