RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 SLC25A35Q3KQZ1 300 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 ARHGAP11BQ3KRB8 267 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 PDCD4Q53EL6 469 aaKnown RBP7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 SPANXN4Q5MJ08 99 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 SAXO2Q658L1 398 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 OR5M10Q6IEU7 315 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 AAGABQ6PD74 315 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 EPGNQ6UW88 154 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 ENPP6Q6UWR7 440 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 C6orf120Q7Z4R8 191 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 MARCH3Q86UD3 253 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 IFNEQ86WN2 208 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 CCDC71Q8IV32 467 aaPredicted RBP7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 CLECL1Q8IZS7 167 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 GLB1L3Q8NCI6 653 aaPredicted RBP7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 NAXEQ8NCW5 288 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 VPS37AQ8NEZ2 397 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 DUSP19Q8WTR2 217 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 SLC9A6Q92581 669 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 MARVELD3Q96A59 401 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 ZBTB9Q96C00 473 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 NEURL3Q96EH8 262 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 C14orf79Q96F83 325 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 PPP1R36Q96LQ0 422 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 ZFP3Q96NJ6 502 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 SDF2Q99470 211 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 TRIM8Q9BZR9 551 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 NMUR2Q9GZQ4 415 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 WDR55Q9H6Y2 383 aaPredicted RBP7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 EXO5Q9H790 373 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 PTGES2Q9H7Z7 377 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 EQTNQ9NQ60 294 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 NPDC1Q9NQX5 325 aaPredicted RBP7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 MED11Q9P086 117 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 PPP4R1LQ9P1A2 415 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 CLCF1Q9UBD9 225 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 KCNE3Q9Y6H6 103 aa7.41□□□□□ -1.22
HDGFL3-205ENST00000568129 NOTCH2Q04721 2471 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 C17orf51A8MQB3 221 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 HMGB1P1B2RPK0 211 aaPredicted RBP7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 NDUFB5O43674 189 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 SASH3O75995 380 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 AK1P00568 194 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 IL6P05231 212 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 ZCCHC18P0CG32 403 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 PRF1P14222 555 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 NID1P14543 1247 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 IDO1P14902 403 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 ZNF17P17021 662 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 MATN1P21941 496 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 GCKP35557 465 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 ZNF136P52737 540 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 ATP12AP54707 1039 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 DLX5P56178 289 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 EEF1A1P68104 462 aaKnown RBP7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 IRX1P78414 480 aaPredicted RBP7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 ZNF141Q15928 474 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 SLC9B1Q4ZJI4 515 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 EEF1A1P5Q5VTE0 462 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 FIGNL1Q6PIW4 674 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 MSANTD1Q6ZTZ1 278 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 DMRTC2Q8IXT2 367 aaPredicted RBP7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 GTPBP8Q8N3Z3 284 aaPredicted RBP7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 COX18Q8N8Q8 333 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 TNIP2Q8NFZ5 429 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 OR4K17Q8NGC6 315 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 OR14L1PQ8NHC6 308 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 MGARPQ8TDB4 240 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 ADAMTS15Q8TE58 950 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 CDS1Q92903 461 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 WNT2BQ93097 391 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 ARSGQ96EG1 525 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 OR7D2Q96RA2 312 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 TUBA1CQ9BQE3 449 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 YIPF4Q9BSR8 244 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 TBL1XR1Q9BZK7 514 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 ZNF350Q9GZX5 532 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 RUBCNLQ9H714 662 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 KCNJ16Q9NPI9 418 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 POLE3Q9NRF9 147 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 TMEM45AQ9NWC5 275 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 ZIM2Q9NZV7 527 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 ICAM5Q9UMF0 924 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 FAF1Q9UNN5 650 aaPredicted RBP7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 ZNF337Q9Y3M9 751 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 SNX8Q9Y5X2 465 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 GMEB1Q9Y692 573 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 AP4B1Q9Y6B7 739 aa7.4□□□□□ -1.22
HDGFL3-205ENST00000568129 TEX15Q9BXT5 2789 aa7.39□□□□□ -1.23
HDGFL3-205ENST00000568129 ABCA4P78363 2273 aa7.39□□□□□ -1.23
HDGFL3-205ENST00000568129 AKAP9Q99996 3911 aa7.39□□□□□ -1.23
HDGFL3-205ENST00000568129 OR2M5A3KFT3 312 aa7.39□□□□□ -1.23
HDGFL3-205ENST00000568129 FAM221AA4D161 298 aa7.39□□□□□ -1.23
HDGFL3-205ENST00000568129 SCO2O43819 266 aa7.39□□□□□ -1.23
HDGFL3-205ENST00000568129 TNFRSF21O75509 655 aa7.39□□□□□ -1.23
HDGFL3-205ENST00000568129 SLC22A3O75751 556 aa7.39□□□□□ -1.23
HDGFL3-205ENST00000568129 NTN1O95631 604 aa7.39□□□□□ -1.23
HDGFL3-205ENST00000568129 AGR2O95994 175 aa7.39□□□□□ -1.23
HDGFL3-205ENST00000568129 IL2RAP01589 272 aa7.39□□□□□ -1.23
HDGFL3-205ENST00000568129 PGRP06401 933 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms