RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 PAK1IP1Q9NWT1 392 aaPredicted RBP4.95□□□□□ -1.62
CAPN3-217ENST00000567817 SPATA7Q9P0W8 599 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 CLEC4EQ9ULY5 219 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 ERGIC3Q9Y282 383 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 FAM32AQ9Y421 112 aaKnown RBP4.95□□□□□ -1.62
CAPN3-217ENST00000567817 DOCK6Q96HP0 2047 aa4.95□□□□□ -1.62
CAPN3-217ENST00000567817 ANKRD17O75179 2603 aaKnown RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 ZNF106Q9H2Y7 1883 aaKnown RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 A0A0U1RQS6 177 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 EDDM13A0A1B0GTR0 161 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 A0A1B0GVG6 124 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 TMEM247A6NEH6 219 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 GABRR3A8MPY1 467 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 A8MX80 341 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 PTGES3LE9PB15 166 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 H0YIZ8 118 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 TNFRSF11BO00300 401 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 KCNJ13O60928 360 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 LRATO95237 230 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 C1orf105O95561 183 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 ZBTB11O95625 1053 aaPredicted RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 CPSF4O95639 269 aaKnown RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 NFATC1O95644 943 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 OXSR1O95747 527 aaPredicted RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 SLC16A8O95907 504 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 EIF2S1P05198 315 aaKnown RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 HNRNPCP07910 306 aaKnown RBP eCLIP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 OCM2P0CE71 109 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 OCMP0CE72 109 aaPredicted RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 C1GALT1C1LP0DN25 315 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 LAMP1P11279 417 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 RHCEP18577 417 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 ACVR2AP27037 513 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 TEAD1P28347 426 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 CD40LGP29965 261 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 GGT2P36268 569 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 LIPAP38571 399 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 CDKN2CP42773 168 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 RANBP1P43487 201 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 YAP1P46937 504 aaKnown RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 DHPSP49366 369 aaPredicted RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 PRIM2P49643 509 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 DAPP51397 102 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 DGKEP52429 567 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 IST1P53990 364 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 UCNP55089 124 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 CDC42P60953 191 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 TBPL1P62380 186 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 TRA2BP62995 288 aaKnown RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 KCNJ10P78508 379 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 CDK6Q00534 326 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 PLIN5Q00G26 463 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 EMX1Q04741 257 aaPredicted RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 CNTN1Q12860 1018 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 RAPSNQ13702 412 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 SCARB2Q14108 478 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 GNA13Q14344 377 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 NR1D2Q14995 579 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 CLCA4Q14CN2 919 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 HEPACAMQ14CZ8 416 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 CNN3Q15417 329 aaKnown RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 CTF1Q16619 201 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 CTU2Q2VPK5 515 aaKnown RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 FAM46CQ5VWP2 391 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 LYSMD4Q5XG99 296 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 SUMO4Q6EEV6 95 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 BHLHB9Q6PI77 547 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 TMEM220Q6QAJ8 160 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 SERPINA13PQ6UXR4 307 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 USP43Q70EL4 1123 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 TMPRSS11BQ86T26 416 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 ADCK1Q86TW2 530 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 CYP4Z1Q86W10 505 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 PTOV1Q86YD1 416 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 TMEM25Q86YD3 366 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 SLC44A2Q8IWA5 706 aaPredicted RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 DCUN1D3Q8IWE4 304 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 SYTL1Q8IYJ3 562 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 METTL4Q8N3J2 472 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 C1orf52Q8N6N3 182 aaKnown RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 RASGEF1AQ8N9B8 481 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 ABHD11Q8NFV4 315 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 KBTBD8Q8NFY9 601 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 OR10G2Q8NGC3 310 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 OR4A15Q8NGL6 344 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 OR2L2Q8NH16 312 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 GIPC3Q8TF64 312 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 FAR1Q8WVX9 515 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 OR8D1Q8WZ84 308 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 OR5P2Q8WZ92 322 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 NR4A3Q92570 626 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 SH3KBP1Q96B97 665 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 PYCR2Q96C36 320 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 NUS1Q96E22 293 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 YIPF6Q96EC8 236 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 C7orf34Q96L11 122 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 DACH2Q96NX9 599 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 COL21A1Q96P44 957 aa4.94□□□□□ -1.62
CAPN3-217ENST00000567817 TEFMQ96QE5 360 aaKnown RBP4.94□□□□□ -1.62
CAPN3-217ENST00000567817 OR4K3Q96R72 315 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms