RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 GIN1Q9NXP7 522 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 NOP53Q9NZM5 478 aaKnown RBP4.33□□□□□ -1.72
CLK3-219ENST00000567805 FLRT3Q9NZU0 649 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 JKAMPQ9P055 326 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 MED11Q9P086 117 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 STOML1Q9UBI4 398 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.33□□□□□ -1.72
CLK3-219ENST00000567805 RAB21Q9UL25 225 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 EIF3LQ9Y262 564 aaKnown RBP4.33□□□□□ -1.72
CLK3-219ENST00000567805 RPH3AQ9Y2J0 694 aaPredicted RBP4.33□□□□□ -1.72
CLK3-219ENST00000567805 V9GYY5 206 aaPredicted RBP4.33□□□□□ -1.72
CLK3-219ENST00000567805 MPDZO75970 2070 aa4.33□□□□□ -1.72
CLK3-219ENST00000567805 A0A087WZY1 265 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 A0A1W2PNV4 684 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 A0A1W2PQD3 144 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 A0A1W2PRB8 838 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 OR2M5A3KFT3 312 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 FAM221AA4D161 298 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 WDR91A4D1P6 747 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 TUBAL3A6NHL2 446 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 SLC22A20A6NK97 555 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 A6NNC1 897 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 C17orf51A8MQB3 221 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 ALG1L2C9J202 215 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 H3BML4 177 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 SCDO00767 359 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 NDUFB5O43674 189 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 TNFRSF21O75509 655 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 CTAG2O75638 210 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 GOSR1O95249 250 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 OXSR1O95747 527 aaPredicted RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 IGKV1D-16P01601 117 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 SERPINE1P05121 402 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 HMGN2P05204 90 aaKnown RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 CRHP06850 196 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 KRT16P08779 473 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 ALOX5P09917 674 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 MYZAPP0CAP1 466 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 ACP2P11117 423 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 LAMP1P11279 417 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 EPXP11678 715 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 HPGDP15428 266 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 ZNF17P17021 662 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 TCEA1P23193 301 aaKnown RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 CPA2P48052 419 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 CCT3P49368 545 aaKnown RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 PRIM2P49643 509 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 STARP49675 285 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 AGFG1P52594 562 aaKnown RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 DIO3P55073 304 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 C21orf58P58505 322 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 ABCE1P61221 599 aaKnown RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 POU6F2P78424 691 aaPredicted RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 EMX2Q04743 252 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 FOXF2Q12947 444 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 SNTB1Q13884 538 aaKnown RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 LASP1Q14847 261 aaKnown RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 DAZAP2Q15038 168 aaPredicted RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 TESK1Q15569 626 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 CHI3L2Q15782 390 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 DUSP5Q16690 384 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 TMEM44Q2T9K0 475 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 LSM12Q3MHD2 195 aaKnown RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 LINC01559Q495D7 138 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 TNFAIP8L3Q5GJ75 292 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 EXOSC6Q5RKV6 272 aaKnown RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 C6orf136Q5SQH8 315 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 IL23RQ5VWK5 629 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 CDC73Q6P1J9 531 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 BHLHB9Q6PI77 547 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 FIGNL1Q6PIW4 674 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 APOOLQ6UXV4 268 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 SPNS3Q6ZMD2 512 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 P4HA3Q7Z4N8 544 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 CAMKMTQ7Z624 323 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 GALNT10Q86SR1 603 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 CROCCP2Q86T23 111 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 MARCH3Q86UD3 253 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 EXOC3L1Q86VI1 746 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 RIMKLAQ8IXN7 391 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 UBQLNLQ8IYU4 475 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 LRRC34Q8IZ02 419 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 GCNT2Q8N0V5 402 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 MEIOBQ8N635 442 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 COX18Q8N8Q8 333 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 OR56A1Q8NGH5 318 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 OR4C3Q8NH37 302 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 SFXN5Q8TD22 340 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 ACTRT2Q8TDY3 377 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 OR5P2Q8WZ92 322 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 JADE3Q92613 823 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 NINJ1Q92982 152 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 MOAP1Q96BY2 351 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 INTS12Q96CB8 462 aaKnown RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 TUBGCP3Q96CW5 907 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 COQ8BQ96D53 544 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 C16orf58Q96GQ5 468 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 PKNOX2Q96KN3 472 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 GPATCH1Q9BRR8 931 aaKnown RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 C1orf50Q9BV19 199 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms