RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 PRR22Q8IZ63 422 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 TMEM251Q8N6I4 163 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 OR7G2Q8NG99 324 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 OR52E4Q8NGH9 312 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 FAM57AQ8TBR7 257 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 TMCO6Q96DC7 493 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 ELP4Q96EB1 424 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 DTNBP1Q96EV8 351 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 VSTM2LQ96N03 204 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 ANGPTL4Q9BY76 406 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 LDAHQ9H6V9 325 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 METTL7AQ9H8H3 244 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 FOLH1BQ9HBA9 442 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 SH3BGRL2Q9UJC5 107 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 MRTO4Q9UKD2 239 aaKnown RBP12.3□□□□□ -0.44
CLK3-218ENST00000566926 C19orf53Q9UNZ5 99 aaPredicted RBP12.3□□□□□ -0.44
CLK3-218ENST00000566926 SNX8Q9Y5X2 465 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 ARHGAP21Q5T5U3 1957 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 SETXQ7Z333 2677 aaKnown RBP12.29□□□□□ -0.44
CLK3-218ENST00000566926 CACNA1CQ13936 2221 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 ELOVL7A1L3X0 281 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 OR14I1A6ND48 311 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 OR6C70A6NIJ9 312 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 SUSD5O60279 629 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 HCN1O60741 890 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 REM1O75628 298 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 PDE9AO76083 593 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 IGHG3P01860 377 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 TPOP07202 933 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 BMP2P12643 396 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 IL12BP29460 328 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 MC3RP41968 323 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 CASP3P42574 277 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 MAGEA5P43359 124 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 MASP1P48740 699 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 CCT3P49368 545 aaKnown RBP12.29□□□□□ -0.44
CLK3-218ENST00000566926 MAN2A2P49641 1150 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 SMSP52788 366 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 PNLIPRP2P54317 469 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 HSF1Q00613 529 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 ZNF155Q12901 538 aaPredicted RBP12.29□□□□□ -0.44
CLK3-218ENST00000566926 VEZF1Q14119 521 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 RGNQ15493 299 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 GTDC1Q4AE62 458 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 SAXO2Q658L1 398 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 SLC30A6Q6NXT4 461 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 MAMDC2Q7Z304 686 aaPredicted RBP12.29□□□□□ -0.44
CLK3-218ENST00000566926 OR2L13Q8N349 312 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 METTL25Q8N6Q8 603 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 RNF148Q8N7C7 305 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 SIMC1Q8NDZ2 872 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 OR10A6Q8NH74 314 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 WDR60Q8WVS4 1066 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 JSRP1Q96MG2 331 aaPredicted RBP12.29□□□□□ -0.44
CLK3-218ENST00000566926 ZNF583Q96ND8 569 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 COL21A1Q96P44 957 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 EXO5Q9H790 373 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 DCLRE1BQ9H816 532 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 GORASP2Q9H8Y8 452 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 PROK2Q9HC23 129 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 SLC6A13Q9NSD5 602 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 NTMQ9P121 344 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 PLEKHB1Q9UF11 243 aaPredicted RBP12.29□□□□□ -0.44
CLK3-218ENST00000566926 TINAGQ9UJW2 476 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 OR10H1Q9Y4A9 318 aa12.29□□□□□ -0.44
CLK3-218ENST00000566926 A0A1B0GVC2 190 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 TMEM247A6NEH6 219 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 E9PLN8 166 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 UPK1AO00322 258 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 AQP7O14520 342 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 BCKDKO14874 412 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 GSTA4O15217 222 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 EMC8O43402 210 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 ZG16O60844 167 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 TRIM3O75382 744 aaPredicted RBP12.28□□□□□ -0.44
CLK3-218ENST00000566926 AGR2O95994 175 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 CT45A8P0DMV1 189 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 CT45A9P0DMV2 189 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 GGT1P19440 569 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 TCN1P20061 433 aaPredicted RBP12.28□□□□□ -0.44
CLK3-218ENST00000566926 ELAVL4P26378 380 aaKnown RBP12.28□□□□□ -0.44
CLK3-218ENST00000566926 PSMD4P55036 377 aaKnown RBP12.28□□□□□ -0.44
CLK3-218ENST00000566926 GNA13Q14344 377 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 PRSS53Q2L4Q9 553 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 CYP27C1Q4G0S4 372 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 CT45A2Q5DJT8 189 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 INTS11Q5TA45 600 aaKnown RBP12.28□□□□□ -0.44
CLK3-218ENST00000566926 TMEM211Q6ICI0 200 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 XKRXQ6PP77 449 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 ANGPTL8Q6UXH0 198 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 TRILQ7L0X0 811 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 ZNF551Q7Z340 670 aaPredicted RBP12.28□□□□□ -0.44
CLK3-218ENST00000566926 DOLPP1Q86YN1 238 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 SLC44A2Q8IWA5 706 aaPredicted RBP12.28□□□□□ -0.44
CLK3-218ENST00000566926 CHERPQ8IWX8 916 aaKnown RBP12.28□□□□□ -0.44
CLK3-218ENST00000566926 MICU2Q8IYU8 434 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 ZNF808Q8N4W9 903 aaPredicted RBP12.28□□□□□ -0.44
CLK3-218ENST00000566926 C11orf65Q8NCR3 313 aa12.28□□□□□ -0.44
CLK3-218ENST00000566926 BHLHE22Q8NFJ8 381 aaPredicted RBP12.28□□□□□ -0.44
CLK3-218ENST00000566926 PHF10Q8WUB8 498 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms