RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 GDF7Q7Z4P5 450 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 GATAD2AQ86YP4 633 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 LIX1LQ8IVB5 337 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 FBXL6Q8N531 539 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 CAMKK1Q8N5S9 505 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 ATP6V1C2Q8NEY4 427 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 ENKURQ8TC29 256 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 RNF170Q96K19 258 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 MCHR1Q99705 422 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 MMP28Q9H239 520 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 RBFOX1Q9NWB1 397 aaKnown RBP15.62■□□□□ 0.09
CMTM3-213ENST00000566756 APOBEC3BQ9UH17 382 aaKnown RBP15.62■□□□□ 0.09
CMTM3-213ENST00000566756 ZNF232Q9UNY5 417 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 POM121BA6NF01 834 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 GABRPO00591 440 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 SLC19A2O60779 497 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 APBB3O95704 486 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 THBS1P07996 1170 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 C8orf89P0DMQ9 161 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 CD53P19397 219 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 PEBP1P30086 187 aaKnown RBP15.62■□□□□ 0.09
CMTM3-213ENST00000566756 KIR2DL3P43628 341 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 MAP2K3P46734 347 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 LRRC32Q14392 662 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 C6orf132Q5T0Z8 1188 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 TRIQKQ629K1 86 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 PTCRAQ6ISU1 281 aaPredicted RBP15.62■□□□□ 0.09
CMTM3-213ENST00000566756 MFSD12Q6NUT3 480 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 CNIH2Q6PI25 160 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 FRRS1Q6ZNA5 592 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 HMGN2P46Q86SG4 172 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 LHFPL3Q86UP9 236 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 NKAIN4Q8IVV8 208 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 C19orf18Q8NEA5 215 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 LILRB4Q8NHJ6 448 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 NT5CQ8TCD5 201 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 BRIX1Q8TDN6 353 aaKnown RBP15.62■□□□□ 0.09
CMTM3-213ENST00000566756 SLC35A4Q96G79 324 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 BMFQ96LC9 184 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 C10orf90Q96M02 699 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 CDX2Q99626 313 aaPredicted RBP15.62■□□□□ 0.09
CMTM3-213ENST00000566756 SLA2Q9H6Q3 261 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 H2AFY2Q9P0M6 372 aaPredicted RBP15.62■□□□□ 0.09
CMTM3-213ENST00000566756 KLHL21Q9UJP4 597 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 CBLCQ9ULV8 474 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 KCNK6Q9Y257 313 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 ZNF443Q9Y2A4 671 aaPredicted RBP15.62■□□□□ 0.09
CMTM3-213ENST00000566756 HS3ST3A1Q9Y663 406 aa15.62■□□□□ 0.09
CMTM3-213ENST00000566756 PRSS38A1L453 326 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 SGK494L7N484 410 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 TFECO14948 347 aaPredicted RBP15.61■□□□□ 0.09
CMTM3-213ENST00000566756 APOL3O95236 402 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 LALBAP00709 142 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 SLC2A2P11168 524 aaPredicted RBP15.61■□□□□ 0.09
CMTM3-213ENST00000566756 YPEL5P62699 121 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 DAB2P98082 770 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 MAP4K2Q12851 820 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 NFATC4Q14934 902 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 RPE65Q16518 533 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 ARHGAP11BQ3KRB8 267 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 PUS10Q3MIT2 529 aaKnown RBP15.61■□□□□ 0.09
CMTM3-213ENST00000566756 CLEC12AQ5QGZ9 265 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 SLC30A6Q6NXT4 461 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 NOXA1Q86UR1 476 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 GALNT12Q8IXK2 581 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 RNF113BQ8IZP6 322 aaKnown RBP15.61■□□□□ 0.09
CMTM3-213ENST00000566756 TCTE3Q8IZS6 198 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 NEIL3Q8TAT5 605 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 HMGB4Q8WW32 186 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 ZG16BQ96DA0 208 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 UBL7Q96S82 380 aaPredicted RBP15.61■□□□□ 0.09
CMTM3-213ENST00000566756 FGF22Q9HCT0 170 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 OR6C2Q9NZP2 312 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 KLF15Q9UIH9 416 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 COLEC10Q9Y6Z7 277 aa15.61■□□□□ 0.09
CMTM3-213ENST00000566756 TNFRSF10CO14798 259 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 ZIC2O95409 532 aaPredicted RBP15.6■□□□□ 0.09
CMTM3-213ENST00000566756 SEMA4FO95754 770 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 PRKAR1AP10644 381 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 AVPR1BP47901 424 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 RPS15AP62244 130 aaKnown RBP15.6■□□□□ 0.09
CMTM3-213ENST00000566756 MLLT1Q03111 559 aaPredicted RBP15.6■□□□□ 0.09
CMTM3-213ENST00000566756 DUSP8Q13202 625 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 ZNF322Q6U7Q0 402 aaPredicted RBP15.6■□□□□ 0.09
CMTM3-213ENST00000566756 PLET1Q6UQ28 207 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 Q6ZS52 159 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 PAQR7Q86WK9 346 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 MARCH9Q86YJ5 346 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 NRMQ8IXM6 262 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 LRRC25Q8N386 305 aaPredicted RBP15.6■□□□□ 0.09
CMTM3-213ENST00000566756 Q8N402 240 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 OR4F15Q8NGB8 312 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 KCNJ15Q99712 375 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 MACROD1Q9BQ69 325 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 PRR14Q9BWN1 585 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 KCNN2Q9H2S1 579 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 EQTNQ9NQ60 294 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 COMMD3Q9UBI1 195 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 TNFRSF10DQ9UBN6 386 aa15.6■□□□□ 0.09
CMTM3-213ENST00000566756 FRS3O43559 492 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms