RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 TRIM3O75382 744 aaPredicted RBP3.32□□□□□ -1.88
CHD9-215ENST00000565442 TSPY4P0CV99 314 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 TSPY10P0CW01 314 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 EPB41P11171 864 aaKnown RBP3.32□□□□□ -1.88
CHD9-215ENST00000565442 NF2P35240 595 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 ACAA2P42765 397 aaKnown RBP3.32□□□□□ -1.88
CHD9-215ENST00000565442 BDKRB1P46663 353 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 NTHL1P78549 312 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 CD47Q08722 323 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 ZNF154Q13106 437 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 KCNJ11Q14654 390 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 CCDC57Q2TAC2 916 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 GLYR1Q49A26 553 aaPredicted RBP3.32□□□□□ -1.88
CHD9-215ENST00000565442 TEX44Q53QW1 395 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 RIPPLY2Q5TAB7 128 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 OR8G2PQ6IF36 304 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 PAMR1Q6UXH9 720 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 DPY19L4Q7Z388 723 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 GPR65Q8IYL9 337 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 NANPQ8TBE9 248 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 SYAP1Q96A49 352 aaPredicted RBP3.32□□□□□ -1.88
CHD9-215ENST00000565442 SDSLQ96GA7 329 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 VSIG2Q96IQ7 327 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 GPA33Q99795 319 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 DEFB126Q9BYW3 111 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 GLT8D2Q9H1C3 349 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 PNO1Q9NRX1 252 aaKnown RBP3.32□□□□□ -1.88
CHD9-215ENST00000565442 TMOD2Q9NZR1 351 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 CGNQ9P2M7 1197 aaKnown RBP3.32□□□□□ -1.88
CHD9-215ENST00000565442 DPM3Q9P2X0 92 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 CHRNA9Q9UGM1 479 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 LAMP5Q9UJQ1 280 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 ANAPC7Q9UJX3 599 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 VSIG4Q9Y279 399 aa3.32□□□□□ -1.88
CHD9-215ENST00000565442 FAM220BPB1ANY3 271 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 E9PLD3 99 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 LATO43561 262 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 NOL3O60936 208 aaKnown RBP3.31□□□□□ -1.88
CHD9-215ENST00000565442 PCCBP05166 539 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 ASNSP08243 561 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 GIG44P09565 113 aaPredicted RBP3.31□□□□□ -1.88
CHD9-215ENST00000565442 HSPA5P11021 654 aaKnown RBP3.31□□□□□ -1.88
CHD9-215ENST00000565442 BCKDHAP12694 445 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 ATP5A1P25705 553 aaKnown RBP3.31□□□□□ -1.88
CHD9-215ENST00000565442 LIM2P55344 173 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 BDH1Q02338 343 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 DPYSL3Q14195 570 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 ATXN7L3Q14CW9 347 aaPredicted RBP3.31□□□□□ -1.88
CHD9-215ENST00000565442 CELF3Q5SZQ8 465 aaKnown RBP3.31□□□□□ -1.88
CHD9-215ENST00000565442 FAM120AOSQ5T036 256 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 DCST2Q5T1A1 773 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 NCR3LG1Q68D85 454 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 UFSP1Q6NVU6 142 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 ARMCX2Q7L311 632 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 ANKRD37Q7Z713 158 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 ZBED8Q8IZ13 594 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 TEX9Q8N6V9 391 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 ARNTL2Q8WYA1 636 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 DTNBP1Q96EV8 351 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 TMEM80Q96HE8 168 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 SERAC1Q96JX3 654 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 FEM1AQ9BSK4 669 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 TPPP3Q9BW30 176 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 MRPL39Q9NYK5 338 aaKnown RBP3.31□□□□□ -1.88
CHD9-215ENST00000565442 CYTH4Q9UIA0 394 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 XPO7Q9UIA9 1087 aaKnown RBP3.31□□□□□ -1.88
CHD9-215ENST00000565442 CRLS1Q9UJA2 301 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 SMC3Q9UQE7 1217 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 L3MBTL1Q9Y468 752 aa3.31□□□□□ -1.88
CHD9-215ENST00000565442 SF3B1O75533 1304 aaKnown RBP eCLIP3.3□□□□□ -1.882e-6■■■■■ 34.9
CHD9-215ENST00000565442 IGLV3-10A0A075B6K4 115 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 ESYT2A0FGR8 921 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 FAM168BA1KXE4 195 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 NUDT21O43809 227 aaKnown RBP3.3□□□□□ -1.88
CHD9-215ENST00000565442 SCRG1O75711 98 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 TM7SF2O76062 418 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 CD55P08174 381 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 HBQ1P09105 142 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 HTR2AP28223 471 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 RND3P61587 244 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 VLDLRP98155 873 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 ELP6Q0PNE2 266 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 ST3GAL3Q11203 375 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 UTF1Q5T230 341 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 BLOC1S2Q6QNY1 142 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 TMEM17Q86X19 198 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 LINC01561Q8N1V8 128 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 OR9A4Q8NGU2 314 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 TRUB1Q8WWH5 349 aaKnown RBP3.3□□□□□ -1.88
CHD9-215ENST00000565442 PSMG2Q969U7 264 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 ZNF414Q96IQ9 312 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 TSGA13Q96PP4 275 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 SLC30A2Q9BRI3 323 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 DPH7Q9BTV6 452 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 PAXXQ9BUH6 204 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 ZNF275Q9NSD4 429 aaPredicted RBP3.3□□□□□ -1.88
CHD9-215ENST00000565442 FARSBQ9NSD9 589 aaKnown RBP3.3□□□□□ -1.88
CHD9-215ENST00000565442 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.3□□□□□ -1.88
CHD9-215ENST00000565442 PPIAL4AQ9Y536 164 aa3.3□□□□□ -1.88
CHD9-215ENST00000565442 PPIAL4CA0A0B4J2A2 164 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms