RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 ST6GALNAC2Q9UJ37 374 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 VDAC3Q9Y277 283 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 PLEKHA6Q9Y2H5 1048 aa9.04□□□□□ -0.96
CMTM3-209ENST00000565003 PRRC2AP48634 2157 aaKnown RBP9.03□□□□□ -0.96
CMTM3-209ENST00000565003 A0A1W2PRB8 838 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 A8MXE2 369 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 LINC01387J3KSC0 135 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 NDUFB5O43674 189 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 ITM2AO43736 263 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 TNFRSF21O75509 655 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 SMNDC1O75940 238 aaKnown RBP eCLIP9.03□□□□□ -0.96
CMTM3-209ENST00000565003 C6orf47O95873 294 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 ALOX5P09917 674 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 CD1EP15812 388 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 TBXA2RP21731 343 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 SERPINB4P48594 390 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 PRIM2P49643 509 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 EEFSECP57772 596 aaKnown RBP9.03□□□□□ -0.96
CMTM3-209ENST00000565003 SIRPAP78324 504 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 LASP1Q14847 261 aaKnown RBP9.03□□□□□ -0.96
CMTM3-209ENST00000565003 PON3Q15166 354 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 CD226Q15762 336 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 GLYR1Q49A26 553 aaPredicted RBP9.03□□□□□ -0.96
CMTM3-209ENST00000565003 OR2A2Q6IF42 318 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 ZCCHC12Q6PEW1 402 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 NUDCD3Q8IVD9 361 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 MREGQ8N565 214 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 METTL25Q8N6Q8 603 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 CNEP1R1Q8N9A8 125 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 GOT1L1Q8NHS2 421 aaPredicted RBP9.03□□□□□ -0.96
CMTM3-209ENST00000565003 PSMA8Q8TAA3 256 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 FNDC9Q8TBE3 224 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 CDS1Q92903 461 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 DACH2Q96NX9 599 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 CXXC4Q9H2H0 198 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 CXorf36Q9H7Y0 433 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 ZNF395Q9H8N7 513 aaPredicted RBP9.03□□□□□ -0.96
CMTM3-209ENST00000565003 RNF122Q9H9V4 155 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 GPATCH2Q9NW75 528 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 SNX8Q9Y5X2 465 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 AP4B1Q9Y6B7 739 aa9.03□□□□□ -0.96
CMTM3-209ENST00000565003 HRNRQ86YZ3 2850 aaPredicted RBP9.02□□□□□ -0.96
CMTM3-209ENST00000565003 A0A1W2PPR1 153 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 WDR91A4D1P6 747 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 SH3D21A4FU49 640 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 SCDO00767 359 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 MSTNO14793 375 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 AQP8O94778 261 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 HRGP04196 525 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 CRHP06850 196 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 G6PDP11413 515 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 DDX5P17844 614 aaKnown RBP9.02□□□□□ -0.97
CMTM3-209ENST00000565003 PSMA4P25789 261 aaKnown RBP9.02□□□□□ -0.97
CMTM3-209ENST00000565003 CCKARP32238 428 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 RPL3P39023 403 aaKnown RBP9.02□□□□□ -0.97
CMTM3-209ENST00000565003 KIR2DL2P43627 348 aaPredicted RBP9.02□□□□□ -0.97
CMTM3-209ENST00000565003 SLC6A8P48029 635 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 CCT3P49368 545 aaKnown RBP9.02□□□□□ -0.97
CMTM3-209ENST00000565003 DIO3P55073 304 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 POU6F2P78424 691 aaPredicted RBP9.02□□□□□ -0.97
CMTM3-209ENST00000565003 FAM27E3Q08E93 113 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 POU4F3Q15319 338 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 GUSBP1Q15486 140 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 PDCD2Q16342 344 aaPredicted RBP9.02□□□□□ -0.97
CMTM3-209ENST00000565003 CTU2Q2VPK5 515 aaKnown RBP9.02□□□□□ -0.97
CMTM3-209ENST00000565003 PLPPR5Q32ZL2 321 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 KRT71Q3SY84 523 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 CPTPQ5TA50 214 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 FBXW10Q5XX13 1052 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 CDC73Q6P1J9 531 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 ZNF474Q6S9Z5 364 aaPredicted RBP9.02□□□□□ -0.97
CMTM3-209ENST00000565003 PAMR1Q6UXH9 720 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 BTLAQ7Z6A9 289 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 RIMKLAQ8IXN7 391 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 GTPBP8Q8N3Z3 284 aaPredicted RBP9.02□□□□□ -0.97
CMTM3-209ENST00000565003 OR5AK3PQ8NH89 298 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 OR5P2Q8WZ92 322 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 TUBGCP3Q96CW5 907 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 COQ8BQ96D53 544 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 SH3YL1Q96HL8 342 aaPredicted RBP9.02□□□□□ -0.97
CMTM3-209ENST00000565003 PPP1R36Q96LQ0 422 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 STACQ99469 402 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 FOXC2Q99958 501 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 BTBD2Q9BX70 525 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 PARD6BQ9BYG5 372 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 C20orf27Q9GZN8 174 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 OPN3Q9H1Y3 402 aaPredicted RBP9.02□□□□□ -0.97
CMTM3-209ENST00000565003 PIGUQ9H490 435 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 UBQLN4Q9NRR5 601 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 DUSP22Q9NRW4 184 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 MED17Q9NVC6 651 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 GIN1Q9NXP7 522 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 ZNF175Q9Y473 711 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 C2CD3Q4AC94 2353 aa9.02□□□□□ -0.97
CMTM3-209ENST00000565003 NUP214P35658 2090 aaPredicted RBP9.01□□□□□ -0.97
CMTM3-209ENST00000565003 NPIPA5A0A0B4J1W7 369 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 A0A1W2PQD3 144 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 C7orf72A4D263 438 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 NPIPA7E9PJI5 369 aa9.01□□□□□ -0.97
CMTM3-209ENST00000565003 EIF1AYO14602 144 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms