RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 LANCL3Q6ZV70 420 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 CMIPQ8IY22 773 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 METTL21AQ8WXB1 218 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 ADIPOR1Q96A54 375 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 LRFN5Q96NI6 719 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 CMKLR1Q99788 373 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 NXF5Q9H1B4 397 aaKnown RBP18.07■□□□□ 0.48
CLN6-205ENST00000564846 BLOC1S6Q9UL45 172 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 PCDHGA6Q9Y5G7 932 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 B4E171 279 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 ALOX12BO75342 701 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 CCL4P13236 92 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 OSMP13725 252 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 TSPAN7P41732 249 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 NR1H2P55055 460 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 FGFBP1Q14512 234 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 EBPQ15125 230 aaKnown RBP18.07■□□□□ 0.48
CLN6-205ENST00000564846 HLA-DQA1Q5Y7H0 255 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 C1orf94Q6P1W5 598 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 CD300LDQ6UXZ3 194 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 GDF7Q7Z4P5 450 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 ANKRD37Q7Z713 158 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 ZNF614Q8N883 585 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 HOXD1Q9GZZ0 328 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 ADNPQ9H2P0 1102 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 A0A087WUU8 490 aa18.06■□□□□ 0.48
CLN6-205ENST00000564846 TRAPPC13A5PLN9 417 aa18.06■□□□□ 0.48
CLN6-205ENST00000564846 TRIM64CA6NLI5 447 aa18.06■□□□□ 0.48
CLN6-205ENST00000564846 IL33O95760 270 aa18.06■□□□□ 0.48
CLN6-205ENST00000564846 CRHBPP24387 322 aa18.06■□□□□ 0.48
CLN6-205ENST00000564846 HLCSP50747 726 aa18.06■□□□□ 0.48
CLN6-205ENST00000564846 EMP2P54851 167 aa18.06■□□□□ 0.48
CLN6-205ENST00000564846 ZNF730Q6ZMV8 503 aa18.06■□□□□ 0.48
CLN6-205ENST00000564846 SLC29A4Q7RTT9 530 aa18.06■□□□□ 0.48
CLN6-205ENST00000564846 ZER1Q7Z7L7 766 aa18.06■□□□□ 0.48
CLN6-205ENST00000564846 ACOT11Q8WXI4 607 aaPredicted RBP18.06■□□□□ 0.48
CLN6-205ENST00000564846 NXT1Q9UKK6 140 aaKnown RBP18.06■□□□□ 0.48
CLN6-205ENST00000564846 ASCC3Q8N3C0 2202 aaKnown RBP18.06■□□□□ 0.48
CLN6-205ENST00000564846 A0A0C4DFX4 3053 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 TO15178 435 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 GDF9O60383 454 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 KLK3P07288 261 aaPredicted RBP18.05■□□□□ 0.48
CLN6-205ENST00000564846 CCDC159P0C7I6 412 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 GKN3PP0CG01 181 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 PRG2P13727 222 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 CHMP24386 653 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 LCN1P31025 176 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 CRISP1P54107 249 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 CXCR4P61073 352 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 PSPHP78330 225 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 PLAURQ03405 335 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 ILKQ13418 452 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 FAAH2Q6GMR7 532 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 RRM2BQ7LG56 351 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 CCDC71Q8IV32 467 aaPredicted RBP18.05■□□□□ 0.48
CLN6-205ENST00000564846 C9orf40Q8IXQ3 194 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 DEPDC4Q8N2C3 294 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 C17orf47Q8NEP4 570 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 CNOT9Q92600 299 aaKnown RBP18.05■□□□□ 0.48
CLN6-205ENST00000564846 GAL3ST4Q96RP7 486 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 SPSB2Q99619 263 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 ZNF559Q9BR84 538 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 EDEM2Q9BV94 578 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 FAM192AQ9GZU8 254 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 WWTR1Q9GZV5 400 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 WDR54Q9H977 334 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 TMEM9BQ9NQ34 198 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 DNAJB12Q9NXW2 375 aaKnown RBP18.05■□□□□ 0.48
CLN6-205ENST00000564846 REV1Q9UBZ9 1251 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 NTNG1Q9Y2I2 539 aa18.05■□□□□ 0.48
CLN6-205ENST00000564846 PRR33A8MZF0 331 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 CBFA2T3O75081 653 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 THY1P04216 161 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 GSTM3P21266 225 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 MMP11P24347 488 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 HTR2AP28223 471 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 CDH15P55291 814 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 E2F1Q01094 437 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 MAD2L1BPQ15013 274 aaPredicted RBP18.04■□□□□ 0.48
CLN6-205ENST00000564846 PTGES3Q15185 160 aaKnown RBP18.04■□□□□ 0.48
CLN6-205ENST00000564846 OR1Q1Q15612 314 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 LAIR2Q6ISS4 152 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 MRPL14Q6P1L8 145 aaKnown RBP18.04■□□□□ 0.48
CLN6-205ENST00000564846 ZNF550Q7Z398 422 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 ZNF527Q8NB42 609 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 SUMF1Q8NBK3 374 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 OR4C3Q8NH37 302 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 ZNF566Q969W8 418 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 UBQLN4Q9NRR5 601 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 SLC39A1Q9NY26 324 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 SLC7A7Q9UM01 511 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 SERINC4A6NH21 518 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 SAGE2PA6NJ88 616 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 ZAR1LA6NP61 321 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 TMX2-CTNND1H3BSU7 103 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 SLC1A7O00341 560 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 BCAS1O75363 584 aaPredicted RBP18.04■□□□□ 0.48
CLN6-205ENST00000564846 ANGPTL1O95841 491 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 ZNF28P17035 718 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 SLC5A2P31639 672 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms