RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CGAP01215 116 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 IGKV1D-16P01601 117 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 NUDT17P0C025 328 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 BCKDHAP12694 445 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 POU2F1P14859 743 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 PPP3CBP16298 524 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 CRYGSP22914 178 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 TCEA1P23193 301 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 HOXC12P31275 282 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 UGT2B10P36537 528 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 HPCAL1P37235 193 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 EIF1P41567 113 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 RFX3P48380 749 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 CLDN20P56880 219 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 RAC1P63000 192 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 PON3Q15166 354 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 GUSBP1Q15486 140 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 UGT3A2Q3SY77 523 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 ARL13AQ5H913 290 aaPredicted RBP10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 PDSS1Q5T2R2 415 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 SHEQ5VZ18 495 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 MFSD12Q6NUT3 480 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 VWA1Q6PCB0 445 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 ZNF474Q6S9Z5 364 aaPredicted RBP10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 PLXDC2Q6UX71 529 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 APOOLQ6UXV4 268 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 FAM214BQ7L5A3 538 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 MTERF4Q7Z6M4 381 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 TRABD2AQ86V40 505 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 EXOC3L1Q86VI1 746 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 GSPT2Q8IYD1 628 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 OR2T11Q8NH01 316 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 OR4C3Q8NH37 302 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 FIG4Q92562 907 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 PIK3R3Q92569 461 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 SLC9A6Q92581 669 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 CAVIN3Q969G5 261 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 PIGTQ969N2 578 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 CIDECQ96AQ7 238 aaPredicted RBP10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 GIMAP5Q96F15 307 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 APOPT1Q96IL0 206 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 WFIKKN1Q96NZ8 548 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 TSSK3Q96PN8 268 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 FAM111AQ96PZ2 611 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 BTBD2Q9BX70 525 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 C12orf65Q9H3J6 166 aaKnown RBP10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 EQTNQ9NQ60 294 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 DLL4Q9NR61 685 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 DUSP22Q9NRW4 184 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 ATAD3AQ9NVI7 634 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 BAIAP2L1Q9UHR4 511 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 PROCRQ9UNN8 238 aa10.96□□□□□ -0.65
GTF3C1-204ENST00000564664 HRNRQ86YZ3 2850 aaPredicted RBP10.96□□□□□ -0.66
GTF3C1-204ENST00000564664 NF1P21359 2839 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 NIPBLQ6KC79 2804 aaeCLIP10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 A0A1W2PRB8 838 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 TLDC2A0PJX2 215 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 C17orf51A8MQB3 221 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 SCDO00767 359 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 ADAMDEC1O15204 470 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 ARHGEF9O43307 516 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 KRT16P08779 473 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 PABPC4LP0CB38 370 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 CD53P19397 219 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 FPR1P21462 350 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 ADH6P28332 368 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 ALDH3A1P30838 453 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 CPOXP36551 454 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 KCNJ5P48544 419 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 ZNF41P51814 821 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 RPL38P63173 70 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 FOXD4Q12950 439 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 LSM12Q3MHD2 195 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 ZNF385BQ569K4 471 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 EXOSC6Q5RKV6 272 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 ANKRD26P1Q6NSI1 321 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 ESPNLQ6ZVH7 1005 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 GGNQ86UU5 652 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 DDIASQ8IXT1 998 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 LRRC75A-AS1Q8N1F1 130 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 SLC16A11Q8NCK7 471 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 OR5M1Q8NGP8 315 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 OR6K3Q8NGY3 331 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 PSMA8Q8TAA3 256 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 FNDC9Q8TBE3 224 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 TWIST2Q8WVJ9 160 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 OR5P2Q8WZ92 322 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 MOAP1Q96BY2 351 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 GMPPAQ96IJ6 420 aaPredicted RBP10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 MED18Q9BUE0 208 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 PRRG4Q9BZD6 226 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 PIGUQ9H490 435 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 MCTS1Q9ULC4 181 aaKnown RBP10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 EMC9Q9Y3B6 208 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 PTGDR2Q9Y5Y4 395 aa10.95□□□□□ -0.66
GTF3C1-204ENST00000564664 H0YC42 278 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 H3BNH8 94 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 ZNF500O60304 480 aaPredicted RBP10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 ACP2P11117 423 aa10.94□□□□□ -0.66
GTF3C1-204ENST00000564664 PRPS1L1P21108 318 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms