RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	AKAIN1	P0CW23	69 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	SRM	P19623	302 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	TLE4	Q04727	773 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	SLC16A12	Q6ZSM3	486 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	FAM46A	Q96IP4	442 aa	Known RBP	4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	NECTIN4	Q96NY8	510 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	GABARAPL1	Q9H0R8	117 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	FGF20	Q9NP95	211 aa	Predicted RBP	4.02	□□□□□ -1.77
MACF1-231	ENST00000564288		Q9Y3F1	56 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	LGALS8	O00214	317 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	C22orf31	O95567	290 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	OLFM2	O95897	454 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	GABRR1	P24046	479 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	DLK1	P80370	383 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	RASGEF1A	Q8N9B8	481 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	C1QTNF3	Q9BXJ4	246 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	AGO1	Q9UL18	857 aa	Known RBP	4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	ZNF214	Q9UL59	606 aa	Predicted RBP	4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	GFRA2	O00451	464 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	ADH1C	P00326	375 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	RBP2	P50120	134 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	CCR6	P51684	374 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	CRISP3	P54108	245 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	PJVK	Q0ZLH3	352 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	TMEM31	Q5JXX7	168 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	CYB5R2	Q6BCY4	276 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	RGL4	Q8IZJ4	473 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	C9orf62	Q8N4C0	152 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	C3orf30	Q96M34	536 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	TMEM38A	Q9H6F2	299 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	MARCH2	Q9P0N8	246 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	RASD1	Q9Y272	281 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	RPH3A	Q9Y2J0	694 aa	Predicted RBP	4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	MED31	Q9Y3C7	131 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	PHOX2A	O14813	284 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	CTDSPL	O15194	276 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	FAM162B	Q5T6X4	162 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	TMCO2	Q7Z6W1	182 aa	Predicted RBP	4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	TANK	Q92844	425 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	SLC22A18	Q96BI1	424 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	EQTN	Q9NQ60	294 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	EIF2B4	Q9UI10	523 aa	Known RBP	4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	PITPNC1	Q9UKF7	332 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	C1R	P00736	705 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	SNRNP70	P08621	437 aa	Known RBP	4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	SDHA	P31040	664 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	SLC10A7	Q0GE19	358 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	SSX7	Q7RTT5	188 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	PXK	Q7Z7A4	578 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	BBS1	Q8NFJ9	593 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	OR4K2	Q8NGD2	314 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	GABARAPL3	Q9BY60	117 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	SLC27A6	Q9Y2P4	619 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	ETV7	Q9Y603	341 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	CRYBB2	P43320	205 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	DVL1P1	P54792	670 aa	Predicted RBP	4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	ALKBH1	Q13686	389 aa	Known RBP	4.02	□□□□□ -1.77
MACF1-231	ENST00000564288		Q6ZSR9	355 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	PPP1R3B	Q86XI6	285 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	TEX26	Q8N6G2	289 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	MBOAT4	Q96T53	435 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	ZNF649	Q9BS31	505 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	HERPUD2	Q9BSE4	406 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	GPR61	Q9BZJ8	451 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	IL20RA	Q9UHF4	553 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	STRAP	Q9Y3F4	350 aa	Known RBP	4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	LOC100509620	A0A075B734	347 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288		M0R129	80 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	SLC16A8	O95907	504 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	VSX2	P58304	361 aa	Predicted RBP	4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	CTAG1A	P78358	180 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	RING1	Q06587	406 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	CELF3	Q5SZQ8	465 aa	Known RBP	4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	FAM171A1	Q5VUB5	890 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	KCTD9	Q7L273	389 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	ANKRD46	Q86W74	232 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	ZNF709	Q8N972	641 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	KATNB1	Q9BVA0	655 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	B3GNT4	Q9C0J1	378 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	LOC102723532	A0A0G2JNH3	316 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	KDELR3	O43731	214 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	GP1BA	P07359	652 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	CD3G	P09693	182 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	SLC6A6	P31641	620 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	ARHGAP19	Q14CB8	494 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	MANEA	Q5SRI9	462 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	GGNBP1	Q5YKI7	109 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	OR8D1	Q8WZ84	308 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	KXD1	Q9BQD3	176 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	VAX2	Q9UIW0	290 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	LTN1	O94822	1766 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	HAS3	O00219	553 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	CD34	P28906	385 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	ARR3	P36575	388 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	CSK	P41240	450 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	CHIT1	Q13231	466 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	CPNE8	Q86YQ8	564 aa		4.02	□□□□□ -1.77
MACF1-231	ENST00000564288	NPAS3	Q8IXF0	933 aa		4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms